RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ZBTB16Q05516 673 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 DMTNQ08495 405 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 SLFN5Q08AF3 891 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 SLC29A2Q14542 456 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 NFIXQ14938 502 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 RABEP1Q15276 862 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 MSMPQ1L6U9 139 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 NRN1LQ496H8 165 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 ZRANB3Q5FWF4 1079 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 SFRP5Q5T4F7 317 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 UBAP2Q5T6F2 1119 aaKnown RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 MCTP1Q6DN14 999 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 KLHL35Q6PF15 583 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 RGS9BPQ6ZS82 235 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 PLEKHM3Q6ZWE6 761 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 MED25Q71SY5 747 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 GLB1L2Q8IW92 636 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 DNAJC10Q8IXB1 793 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 ADGRF2Q8IZF7 708 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 KIF18AQ8NI77 898 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 ELP4Q96EB1 424 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 LENG8Q96PV6 779 aaPredicted RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 SOX7Q9BT81 388 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 HERC2P3Q9BVR0 1158 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 DUSP15Q9H1R2 295 aaPredicted RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 STN1Q9H668 368 aaKnown RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 RXFP1Q9HBX9 757 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 POLR3BQ9NW08 1133 aaPredicted RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 CHCHD3Q9NX63 227 aaKnown RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 ZSCAN32Q9NX65 697 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 SLC25A10Q9UBX3 287 aaPredicted RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 LIMA1Q9UHB6 759 aaKnown RBP5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 SLCO3A1Q9UIG8 710 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 PCDHA5Q9Y5H7 936 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 LRRC37A3O60309 1634 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 PKD1L3Q7Z443 1732 aa5.46□□□□□ -1.54
VPS35P1-201ENST00000563400 RPTORQ8N122 1335 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 A0A0A6YYJ9 748 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 TMEM82A0PJX8 343 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 FRMD3A2A2Y4 597 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 A8MVJ9 347 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 KIF28PB7ZC32 967 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 H0Y858 1186 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 H0YIN7 160 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 SYN3O14994 580 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 COQ9O75208 318 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 LEFTY1O75610 366 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 DNAJB5O75953 348 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 SEC24DO94855 1032 aaPredicted RBP5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MPIG6BO95866 241 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 PNPP00491 289 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 CD1AP06126 327 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 SBK3P0C264 359 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MYL6BP14649 208 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 PCSK1P29120 753 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MCM7P33993 719 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 BSGP35613 385 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MATR3P43243 847 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 SULT1E1P49888 294 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 HNMTP50135 292 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 RCN2Q14257 317 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 PCLAFQ15004 111 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MORF4L2Q15014 288 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 R3HDM1Q15032 1099 aaKnown RBP5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 HFEQ30201 348 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 NHSL2Q5HYW2 709 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 C9orf152Q5JTZ5 239 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 GLRA4Q5JXX5 417 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 C10orf76Q5T2E6 689 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MROH9Q5TGP6 573 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 FCRL6Q6DN72 434 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MRNIPQ6NTE8 343 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 FAM111BQ6SJ93 734 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 LRSAM1Q6UWE0 723 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 CHST9Q7L1S5 443 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 KCTD20Q7Z5Y7 419 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MON1AQ86VX9 555 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 FAM217AQ8IXS0 508 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 PQLC1Q8N2U9 271 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 SFRP1Q8N474 314 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 CTCFLQ8NI51 663 aaPredicted RBP5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 CYFIP2Q96F07 1278 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MISP3Q96FF7 219 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 TOE1Q96GM8 510 aaKnown RBP5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 WDFY2Q96P53 400 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 PKP4Q99569 1192 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 NAA11Q9BSU3 229 aaPredicted RBP5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MECRQ9BV79 373 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 GPR62Q9BZJ7 368 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MS4A7Q9GZW8 240 aaPredicted RBP5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 DNAJC18Q9H819 358 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 VPS37BQ9H9H4 285 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 ERVK13-1Q9NX77 482 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 SH3BP4Q9P0V3 963 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 MYOTQ9UBF9 498 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 ASH2LQ9UBL3 628 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 DKK3Q9UBP4 350 aa5.45□□□□□ -1.54
VPS35P1-201ENST00000563400 ZNF70Q9UC06 446 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms