RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 COL28A1Q2UY09 1125 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 HLA-BQ31612 363 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 TDRD12Q587J7 1177 aaKnown RBP13.89□□□□□ -0.19
SPG7-207ENST00000563218 RAD9BQ6WBX8 426 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 CCNI2Q6ZMN8 369 aaPredicted RBP13.89□□□□□ -0.19
SPG7-207ENST00000563218 ENOSF1Q7L5Y1 443 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 FAM217AQ8IXS0 508 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 CCDC170Q8IYT3 715 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 CPXM2Q8N436 756 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 WFDC5Q8TCV5 224 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 DDI1Q8WTU0 396 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 PRCCQ92733 491 aaPredicted RBP13.89□□□□□ -0.19
SPG7-207ENST00000563218 DCLK3Q9C098 648 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 DEF6Q9H4E7 631 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
SPG7-207ENST00000563218 TM7SF3Q9NS93 570 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 SFMBT1Q9UHJ3 866 aa13.89□□□□□ -0.19
SPG7-207ENST00000563218 GOLGA8CPA6NN73 597 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 F8VZ95 297 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 KCNK3O14649 394 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 ZSCAN12O43309 604 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 MSI1O43347 362 aaKnown RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 MATKP42679 507 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 CSNK1EP49674 416 aaKnown RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 TKTL1P51854 596 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 ARID5AQ03989 594 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 KLHL30Q0D2K2 578 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 E4F1Q66K89 784 aaPredicted RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 SERPINA13PQ6UXR4 307 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 RSRC2Q7L4I2 434 aaKnown RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 GLRX5Q86SX6 157 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 TADA2BQ86TJ2 420 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 CADM4Q8NFZ8 388 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 EDEM1Q92611 657 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 TMEM176AQ96HP8 235 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 ZDHHC5Q9C0B5 715 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 MTG2Q9H4K7 406 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 SNX11Q9Y5W9 270 aa13.88□□□□□ -0.19
SPG7-207ENST00000563218 BZW2Q9Y6E2 419 aaKnown RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 EPN1Q9Y6I3 576 aaPredicted RBP13.88□□□□□ -0.19
SPG7-207ENST00000563218 TDRD6O60522 2096 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 FLNBO75369 2602 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 SETXQ7Z333 2677 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 SSU72P8A0A1W2PR75 194 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 GFPT2O94808 682 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 NDUFA10O95299 355 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 IPO7O95373 1038 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 CER1O95813 267 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 CYBBP04839 570 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 CCDC175P0C221 793 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 ACADMP11310 421 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 OXTRP30559 389 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 GCNT1Q02742 428 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 PDE4CQ08493 712 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 ADIGQ0VDE8 80 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 TRIP4Q15650 581 aaPredicted RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 PTPRNQ16849 979 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 FNDC3BQ53EP0 1204 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 KCNT1Q5JUK3 1230 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 ARHGAP17Q68EM7 881 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 CHST9Q7L1S5 443 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 ADIPOR2Q86V24 386 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 CCAR2Q8N163 923 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 C17orf53Q8N3J3 647 aaPredicted RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 OR2T3Q8NH03 318 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 PLD4Q96BZ4 506 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 CDK5RAP1Q96SZ6 601 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 LHX5Q9H2C1 402 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 CCDC86Q9H6F5 360 aaKnown RBP13.87□□□□□ -0.19
SPG7-207ENST00000563218 KCND1Q9NSA2 647 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 ABCB8Q9NUT2 735 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 ARHGAP20Q9P2F6 1191 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 TSPAN16Q9UKR8 245 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 STRIP2Q9ULQ0 834 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPG7-207ENST00000563218 RAXQ9Y2V3 346 aa13.87□□□□□ -0.19
SPG7-207ENST00000563218 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 PIK3R2O00459 728 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 NPC1O15118 1278 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 AKR1B10O60218 316 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 ZBED1O96006 694 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 TBXAS1P24557 533 aaPredicted RBP13.86□□□□□ -0.19
SPG7-207ENST00000563218 PRKCIP41743 596 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 ZNF132P52740 706 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 RPS14P62263 151 aaKnown RBP13.86□□□□□ -0.19
SPG7-207ENST00000563218 IL9RQ01113 521 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
SPG7-207ENST00000563218 EIF4HQ15056 248 aaKnown RBP13.86□□□□□ -0.19
SPG7-207ENST00000563218 KIF19Q2TAC6 998 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 HGSNATQ68CP4 663 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 PM20D1Q6GTS8 502 aa13.86□□□□□ -0.19
SPG7-207ENST00000563218 RFWD3Q6PCD5 774 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms