RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 INHBBP09529 407 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 CD247P20963 164 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 PTP4A2Q12974 167 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 NFX1Q12986 1120 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 STX3Q13277 289 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 ITGADQ13349 1161 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 ARL13BQ3SXY8 428 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 ATP13A4Q4VNC1 1196 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 RNF149Q8NC42 400 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 TAMM41Q96BW9 452 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 SPATA33Q96N06 139 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 NIFKQ9BYG3 293 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 GNPTGQ9UJJ9 305 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 CDH7Q9ULB5 785 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 EVPLQ92817 2033 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 PFDN6O15212 129 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 PROSCO94903 275 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 VNN1O95497 513 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 NCF2P19878 526 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 ATXN3P54252 364 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 BNIP3Q12983 259 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 FLOT2Q14254 428 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 SF3B4Q15427 424 aaKnown RBP eCLIP14.36□□□□□ -0.113e-9■■■■■ 38.1
GTF3C1-203ENST00000562609 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 TRIM16LQ309B1 348 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 PLEKHA7Q6IQ23 1121 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 TMEM126BQ8IUX1 230 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 KATNAL2Q8IYT4 538 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 SLC44A1Q8WWI5 657 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 GPR20Q99678 358 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 C1orf112Q9NSG2 853 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 CORINQ9Y5Q5 1042 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 PSTPIP1O43586 416 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 ACAT1P24752 427 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 RPL10P27635 214 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 EPHA3P29320 983 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 MRPS5P82675 430 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 USP37Q86T82 979 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 PCYOX1LQ8NBM8 494 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 EXD1Q8NHP7 514 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 DDX1Q92499 740 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 CEP44Q9C0F1 390 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 CCDC68Q9H2F9 335 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 APOBEC3GQ9HC16 384 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 OLAHQ9NV23 265 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 ARHGAP26Q9UNA1 814 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 DNAJC16Q9Y2G8 782 aa14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-203ENST00000562609 C7orf72A4D263 438 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 CXCL11O14625 94 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 GRIN3BO60391 1043 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 LYPLA1O75608 230 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 C4BPAP04003 597 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 TXNP10599 105 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 TUBA4AP68366 448 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 ZACNQ401N2 412 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 FGD3Q5JSP0 725 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 SETD3Q86TU7 594 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 RAVER1Q8IY67 606 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 PPP1R14CQ8TAE6 165 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 CPT1BQ92523 772 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 HPS1Q92902 700 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 FERMT1Q9BQL6 677 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 TMEM79Q9BSE2 394 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 STK39Q9UEW8 545 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 TCRBV9S1A1TA0A576 114 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 CFAP99D6REC4 459 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 TOM1L1O75674 476 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 CST3P01034 146 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 PTPN1P18031 435 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 ZBED5Q49AG3 693 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 FAM160B1Q5W0V3 765 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 TMEM270Q6UE05 265 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 C15orf39Q6ZRI6 1047 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 PPIL6Q8IXY8 311 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 MCOLN2Q8IZK6 566 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 PHTF2Q8N3S3 785 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 PPP1R13LQ8WUF5 828 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 ZNF778Q96MU6 729 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 C10orf88Q9H8K7 445 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 PARVBQ9HBI1 364 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 PCDH9Q9HC56 1237 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 ERGIC3Q9Y282 383 aa14.35□□□□□ -0.11
GTF3C1-203ENST00000562609 DYTNA2CJ06 578 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 ZBTB42B2RXF5 422 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 PMM2O15305 246 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 B4GALT5O43286 388 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 MAFO75444 373 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 BMP10O95393 424 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 L1CAMP32004 1257 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 CLCN3P51790 818 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 TXNL4AP83876 142 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 LAMTOR4Q0VGL1 99 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 PPP2R5DQ14738 602 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 ZNF394Q53GI3 561 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 PPP6R3Q5H9R7 873 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 WDR44Q5JSH3 913 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 MAP1SQ66K74 1059 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms