RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 CDK7P50613 346 aa25.21■■□□□ 1.63
SHF-207ENST00000560540 RPL26P61254 145 aaKnown RBP25.21■■□□□ 1.63
SHF-207ENST00000560540 IRF5Q13568 498 aa25.21■■□□□ 1.63
SHF-207ENST00000560540 CCNIQ14094 377 aa25.21■■□□□ 1.63
SHF-207ENST00000560540 ZNF484Q5JVG2 852 aa25.21■■□□□ 1.63
SHF-207ENST00000560540 PDPK2PQ6A1A2 396 aa25.21■■□□□ 1.63
SHF-207ENST00000560540 ARNTL2Q8WYA1 636 aa25.21■■□□□ 1.63
SHF-207ENST00000560540 RCOR3Q9P2K3 495 aaPredicted RBP25.21■■□□□ 1.63
SHF-207ENST00000560540 CDH22Q9UJ99 828 aa25.21■■□□□ 1.63
SHF-207ENST00000560540 A0A087WZ62 844 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 ZNF195O14628 629 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 MYCNP04198 464 aaPredicted RBP25.2■■□□□ 1.62
SHF-207ENST00000560540 MMP3P08254 477 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 ERFP50548 548 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 ABCE1P61221 599 aaKnown RBP25.2■■□□□ 1.62
SHF-207ENST00000560540 CACNB2Q08289 660 aaPredicted RBP25.2■■□□□ 1.62
SHF-207ENST00000560540 ACOT1Q86TX2 421 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 TLK2Q86UE8 772 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 C10orf107Q8IVU9 208 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 FDXACB1Q9BRP7 624 aaPredicted RBP25.2■■□□□ 1.62
SHF-207ENST00000560540 SLC17A6Q9P2U8 582 aa25.2■■□□□ 1.62
SHF-207ENST00000560540 SF3B1O75533 1304 aaKnown RBP eCLIP25.19■■□□□ 1.623e-6■■■■■ 137.9
SHF-207ENST00000560540 OPHN1O60890 802 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 MX2P20592 715 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 RAB27AP51159 221 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 ASPHQ12797 758 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 ARHGAP17Q68EM7 881 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 POU5F2Q8N7G0 328 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 LINC01465Q8N7H1 131 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 MRPL45Q9BRJ2 306 aaKnown RBP25.19■■□□□ 1.62
SHF-207ENST00000560540 B3GNT5Q9BYG0 378 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 FAM49BQ9NUQ9 324 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 ERAP1Q9NZ08 941 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 CPSF2Q9P2I0 782 aaKnown RBP25.19■■□□□ 1.62
SHF-207ENST00000560540 TBC1D30Q9Y2I9 924 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 SCN1AP35498 2009 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 STK10O94804 968 aaKnown RBP25.19■■□□□ 1.62
SHF-207ENST00000560540 ZCCHC18P0CG32 403 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 CCDC130P13994 396 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 GARSP41250 739 aaKnown RBP25.19■■□□□ 1.62
SHF-207ENST00000560540 CCDC153Q494R4 210 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 RALGPS1Q5JS13 557 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 RASSF3Q86WH2 238 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 COLGALT1Q8NBJ5 622 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 PYDC1Q8WXC3 89 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 ISL2Q96A47 359 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 EBF3Q9H4W6 596 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 PNPOQ9NVS9 261 aa25.19■■□□□ 1.62
SHF-207ENST00000560540 RALBP11234 206 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 MGAT1P26572 445 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 HOXD10P28358 340 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 POLE2P56282 527 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 ST13P4Q8IZP2 240 aaPredicted RBP25.18■■□□□ 1.62
SHF-207ENST00000560540 SHKBP1Q8TBC3 707 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 KIF12Q96FN5 646 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 DDX50Q9BQ39 737 aaKnown RBP25.18■■□□□ 1.62
SHF-207ENST00000560540 CENPKQ9BS16 269 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 C16orf70Q9BSU1 422 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 KLHL4Q9C0H6 718 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 RNPEPQ9H4A4 650 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 ADAM28Q9UKQ2 775 aa25.18■■□□□ 1.62
SHF-207ENST00000560540 RNASEH1O60930 286 aaKnown RBP25.17■■□□□ 1.62
SHF-207ENST00000560540 GP5P40197 560 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 MAGEA12P43365 314 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 RNF111Q6ZNA4 994 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 BEGAINQ9BUH8 593 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 TMEM216Q9P0N5 145 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 PSAT1Q9Y617 370 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 AKR1A1P14550 325 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 ITGAXP20702 1163 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 ARL4AP40617 200 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 ATXN1P54253 815 aaKnown RBP25.17■■□□□ 1.62
SHF-207ENST00000560540 CRADDP78560 199 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 FSCBQ5H9T9 825 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 ATG14Q6ZNE5 492 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 STRADAQ7RTN6 431 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 UNC93AQ86WB7 457 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 CCDC185Q8N715 623 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 RAET1EQ8TD07 263 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 SLC26A7Q8TE54 656 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 NCSTNQ92542 709 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 CPNE1Q99829 537 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 TXNDC16Q9P2K2 825 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 PCDHB12Q9Y5F1 795 aa25.17■■□□□ 1.62
SHF-207ENST00000560540 CASQ2O14958 399 aaPredicted RBP25.16■■□□□ 1.62
SHF-207ENST00000560540 HOXD8P13378 290 aaPredicted RBP25.16■■□□□ 1.62
SHF-207ENST00000560540 PRKAR2AP13861 404 aaKnown RBP25.16■■□□□ 1.62
SHF-207ENST00000560540 UQCRBP14927 111 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 ACAT1P24752 427 aaKnown RBP25.16■■□□□ 1.62
SHF-207ENST00000560540 CCND3P30281 292 aaPredicted RBP25.16■■□□□ 1.62
SHF-207ENST00000560540 ARRB2P32121 409 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 RPL34P49207 117 aaKnown RBP25.16■■□□□ 1.62
SHF-207ENST00000560540 EPHB1P54762 984 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 SESN2P58004 480 aaPredicted RBP25.16■■□□□ 1.62
SHF-207ENST00000560540 SPANXN3Q5MJ09 141 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 GRTP1Q5TC63 336 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 FERMT1Q9BQL6 677 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 POMPQ9Y244 141 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 SSX2IPQ9Y2D8 614 aa25.16■■□□□ 1.62
SHF-207ENST00000560540 NME7Q9Y5B8 376 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms