RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 TRIM38O00635 465 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 ACSL4O60488 711 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 GABBR2O75899 941 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 MT-CO3P00414 261 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 SRPRAP08240 638 aaKnown RBP20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 C5AR1P21730 350 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 NR2F2P24468 414 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 GTF2H1P32780 548 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 CTSOP43234 321 aaPredicted RBP20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 PPP2CBP62714 309 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 PPP2CAP67775 309 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 E2F1Q01094 437 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 GOLGA7BQ2TAP0 167 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 FSCBQ5H9T9 825 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 KRT39Q6A163 491 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 NAPEPLDQ6IQ20 393 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 IQCHQ86VS3 1027 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 UNC45BQ8IWX7 931 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 PTPRN2Q92932 1015 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 ZNF578Q96N58 590 aaPredicted RBP20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 IPO9Q96P70 1041 aaKnown RBP20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 LGMNQ99538 433 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 MMRN2Q9H8L6 949 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 FAM13BQ9NYF5 915 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 STIM2Q9P246 746 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 SLCO3A1Q9UIG8 710 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 PCDHB1Q9Y5F3 818 aa20.49■□□□□ 0.87
RABGGTA-214ENST00000560163 NYNRINQ9P2P1 1898 aaKnown RBP20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 EDDM13A0A1B0GTR0 161 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 SIGLEC6O43699 453 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 DRD3P35462 400 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 SLC11A2P49281 568 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 DAOAP59103 153 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 RPS24P62847 133 aaKnown RBP20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 BST2Q10589 180 aaKnown RBP20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 ZNF211Q13398 564 aaPredicted RBP20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 TAF1BQ53T94 588 aaPredicted RBP20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 PITRM1Q5JRX3 1037 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 CDCP2Q5VXM1 449 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 NUGGCQ68CJ6 796 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 KDM7AQ6ZMT4 941 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 MMS22LQ6ZRQ5 1243 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 FAM186BQ8IYM0 893 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 CEP57L1Q8IYX8 460 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 SLC25A45Q8N413 288 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 SNRNP27Q8WVK2 155 aaKnown RBP20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 CPNE5Q9HCH3 593 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 CNGB3Q9NQW8 809 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 RAB20Q9NX57 234 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 SSUH2Q9Y2M2 353 aa20.48■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3DA0A087WVF3 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3IA0A087WXS9 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3EA0A087X179 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3KA0A087X1G2 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3FA6NER0 549 aaPredicted RBP20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3LB9A6J9 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 DXOO77932 396 aaKnown RBP20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 ADH1BP00325 375 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3HP0C7X1 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 KRT13P13646 458 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 PSMC2P35998 433 aaKnown RBP20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 PSMD8P48556 350 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 PCBP4P57723 403 aaKnown RBP20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 OVGP1Q12889 678 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3GQ6DHY5 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3CQ6IPX1 549 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 TBC1D3Q8IZP1 549 aaPredicted RBP20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 STK40Q8N2I9 435 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 HJURPQ8NCD3 748 aaPredicted RBP20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 FBXL13Q8NEE6 735 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 UBA3Q8TBC4 463 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 DOCK9Q9BZ29 2069 aa20.47■□□□□ 0.87
RABGGTA-214ENST00000560163 B8ZZF3 427 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 UCNP55089 124 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 TMPRSS3P57727 454 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 ECT2LQ008S8 904 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 SGO2Q562F6 1265 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 SIX6OS1Q8N1H7 587 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 TTC9Q92623 222 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 NAF1Q96HR8 494 aaKnown RBP20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 KDM4CQ9H3R0 1056 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 CYTH4Q9UIA0 394 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 PIEZO2Q9H5I5 2752 aa20.46■□□□□ 0.87
RABGGTA-214ENST00000560163 SDC3O75056 442 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 MZF1P28698 734 aaPredicted RBP20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 METAP1P53582 386 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 TBX4P57082 545 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 ARHGAP40Q5TG30 622 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 PRPF39Q86UA1 669 aaKnown RBP20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 CARNMT1Q8N4J0 409 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 EEF2KMTQ96G04 330 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 FOXD4L1Q9NU39 408 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 HESX1Q9UBX0 185 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 DMTF1Q9Y222 760 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 BOD1L1Q8NFC6 3051 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 COL12A1Q99715 3063 aa20.45■□□□□ 0.86
RABGGTA-214ENST00000560163 O00370 1275 aa20.44■□□□□ 0.86
RABGGTA-214ENST00000560163 MAGEC1O60732 1142 aa20.44■□□□□ 0.86
RABGGTA-214ENST00000560163 IL1BP01584 269 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms