RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 FAM72AQ5TYM5 149 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 FAM72DQ6L9T8 149 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 SCYL2Q6P3W7 929 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 LRRC31Q6UY01 552 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 TRMT11Q7Z4G4 463 aaKnown RBP17.34■□□□□ 0.37
RPL28-209ENST00000560055 FAM72BQ86X60 149 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 TMTC1Q8IUR5 882 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 TMEM139Q8IV31 216 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 TXNDC5Q8NBS9 432 aaKnown RBP17.34■□□□□ 0.37
RPL28-209ENST00000560055 SPC24Q8NBT2 197 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 ZNF564Q8TBZ8 553 aaPredicted RBP17.34■□□□□ 0.37
RPL28-209ENST00000560055 BTBD6Q96KE9 485 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 NCAPGQ9BPX3 1015 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 IRF2BPLQ9H1B7 796 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 THAP10Q9P2Z0 257 aaPredicted RBP17.34■□□□□ 0.37
RPL28-209ENST00000560055 INTUQ9ULD6 942 aa17.34■□□□□ 0.37
RPL28-209ENST00000560055 RIF1Q5UIP0 2472 aaKnown RBP17.33■□□□□ 0.37
RPL28-209ENST00000560055 SOWAHDA6NJG2 315 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 H0Y626 953 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 SGK1O00141 431 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 NPC1O15118 1278 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 GFRA3O60609 400 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 LRIG2O94898 1065 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 KLF8O95600 359 aaPredicted RBP17.33■□□□□ 0.36
RPL28-209ENST00000560055 SP9P0CG40 484 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 HOXC13P31276 330 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 L1CAMP32004 1257 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 PLK1P53350 603 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 SEMA3BQ13214 749 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 ENPP2Q13822 863 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 DMC1Q14565 340 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 EFHC2Q5JST6 749 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 EOGTQ5NDL2 527 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 MBLAC2Q68D91 279 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 CCDC117Q8IWD4 279 aaPredicted RBP17.33■□□□□ 0.36
RPL28-209ENST00000560055 CCDC33Q8N5R6 958 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 OR52K2Q8NGK3 314 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 TTC17Q96AE7 1141 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 ACOX2Q99424 681 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 GABRG3Q99928 467 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 CIPCQ9C0C6 399 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 ZYG11BQ9C0D3 744 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 CD248Q9HCU0 757 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 MPP6Q9NZW5 540 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 KIAA1522Q9P206 1035 aaPredicted RBP17.33■□□□□ 0.36
RPL28-209ENST00000560055 IP6K2Q9UHH9 426 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 DOCK4Q8N1I0 1966 aa17.33■□□□□ 0.36
RPL28-209ENST00000560055 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 EIF3CLB5ME19 914 aaKnown RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 MYO1FO00160 1098 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 SRGAP2O75044 1071 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 RNF8O76064 485 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 MTA2O94776 668 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 NTSR1P30989 418 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 CSTF1Q05048 431 aaKnown RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 ZNF177Q13360 481 aaPredicted RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 SLC12A1Q13621 1099 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 TCEAL1Q15170 157 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 CRY1Q16526 586 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 PTPRNQ16849 979 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 PLEKHG6Q3KR16 790 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 PITRM1Q5JRX3 1037 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 DAB2IPQ5VWQ8 1189 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 TMEM92Q6UXU6 159 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 ASCL5Q7RTU5 278 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 NLRP14Q86W24 1093 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 PSTKQ8IV42 348 aaKnown RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 CHPFQ8IZ52 775 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 PYROXD2Q8N2H3 581 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 UCMAQ8WVF2 138 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 SORCS1Q8WY21 1168 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 ALG14Q96F25 216 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 EIF3CQ99613 913 aaKnown RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 FAM126AQ9BYI3 521 aaPredicted RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 RETREG1Q9H6L5 497 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 GRPEL1Q9HAV7 217 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 OSGEPQ9NPF4 335 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 CTTNBP2NLQ9P2B4 639 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 USP18Q9UMW8 372 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 SLC8A2Q9UPR5 921 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 OR51B4Q9Y5P0 310 aa17.32■□□□□ 0.36
RPL28-209ENST00000560055 EPN1Q9Y6I3 576 aaPredicted RBP17.32■□□□□ 0.36
RPL28-209ENST00000560055 MUC22E2RYF6 1773 aaPredicted RBP17.31■□□□□ 0.36
RPL28-209ENST00000560055 PRPSAP2O60256 369 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 NDUFA10O95299 355 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 DLDP09622 509 aaKnown RBP17.31■□□□□ 0.36
RPL28-209ENST00000560055 TCF4P15884 667 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 IL1R2P27930 398 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 MZF1P28698 734 aaPredicted RBP17.31■□□□□ 0.36
RPL28-209ENST00000560055 CYLC1P35663 651 aaPredicted RBP17.31■□□□□ 0.36
RPL28-209ENST00000560055 CSKP41240 450 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 NBL1P41271 181 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 IL12RB1P42701 662 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 OXCT1P55809 520 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 ZNF234Q14588 700 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 E2F5Q15329 346 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 ERMARDQ5T6L9 678 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 RAD9BQ6WBX8 426 aa17.31■□□□□ 0.36
RPL28-209ENST00000560055 SETD3Q86TU7 594 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms