RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 METTL12A8MUP2 240 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 FAM228BP0C875 321 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 TPMTP51580 245 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 ALKBH5Q6P6C2 394 aaKnown RBP21.35■■□□□ 1.01
PSEN1-225ENST00000560005 KAT5Q92993 513 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 SMARCD1Q96GM5 515 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 DCBLD2Q96PD2 775 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 UBL7Q96S82 380 aaPredicted RBP21.35■■□□□ 1.01
PSEN1-225ENST00000560005 XYLT2Q9H1B5 865 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 LZTFL1Q9NQ48 299 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.35■■□□□ 1.01
PSEN1-225ENST00000560005 COMMD8Q9NX08 183 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 PLK2Q9NYY3 685 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 NAGPAQ9UK23 515 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 LSM7Q9UK45 103 aaKnown RBP21.35■■□□□ 1.01
PSEN1-225ENST00000560005 REXO2Q9Y3B8 237 aaKnown RBP21.35■■□□□ 1.01
PSEN1-225ENST00000560005 PCDHB4Q9Y5E5 795 aa21.35■■□□□ 1.01
PSEN1-225ENST00000560005 MYH10P35580 1976 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 CFAP46Q8IYW2 2715 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 CYP26A1O43174 497 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 GZMAP12544 262 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 ABCG1P45844 678 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 CCDC157Q569K6 752 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 SPOPLQ6IQ16 392 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 CACUL1Q86Y37 369 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 TMPRSS6Q8IU80 811 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 RNF10Q8N5U6 811 aaKnown RBP21.34■■□□□ 1.01
PSEN1-225ENST00000560005 SLC30A5Q8TAD4 765 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 PIP4K2CQ8TBX8 421 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 CALR3Q96L12 384 aaKnown RBP21.34■■□□□ 1.01
PSEN1-225ENST00000560005 SMYD3Q9H7B4 428 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 KRT82Q9NSB4 513 aa21.34■■□□□ 1.01
PSEN1-225ENST00000560005 AP1G2O75843 785 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 CYP11B1P15538 503 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 OXTRP30559 389 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 IL12RB1P42701 662 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 CDH8P55286 799 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 CDR2Q01850 454 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 TRIM72Q6ZMU5 477 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 PDCD7Q8N8D1 485 aaKnown RBP21.33■■□□□ 1.01
PSEN1-225ENST00000560005 ZMIZ2Q8NF64 920 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 C1orf216Q8TAB5 229 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 SIPA1Q96FS4 1042 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 P2RY11Q96G91 374 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 SYT11Q9BT88 431 aa21.33■■□□□ 1.01
PSEN1-225ENST00000560005 TLR8Q9NR97 1041 aaKnown RBP21.33■■□□□ 1.01
PSEN1-225ENST00000560005 MAST4O15021 2626 aa21.33■■□□□ 1
PSEN1-225ENST00000560005 SHROOM3Q8TF72 1996 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 BTNL10A8MVZ5 291 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 C1QL1O75973 258 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 BEST1O76090 585 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 H2AFZP0C0S5 128 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 PNMA6AP0CW24 399 aaPredicted RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 ACO1P21399 889 aaKnown RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 ATP5C1P36542 298 aaKnown RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 CSNK1EP49674 416 aaKnown RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 SUZ12Q15022 739 aaKnown RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 SMAD1Q15797 465 aaKnown RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 IFI16Q16666 785 aaKnown RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 H2AFVQ71UI9 128 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 FUKQ8N0W3 1084 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 EPS8L1Q8TE68 723 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 SNX19Q92543 992 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 PRCCQ92733 491 aaPredicted RBP21.32■■□□□ 1
PSEN1-225ENST00000560005 SLCO1B1Q9Y6L6 691 aa21.32■■□□□ 1
PSEN1-225ENST00000560005 DDX3XO00571 662 aaKnown RBP eCLIP21.31■■□□□ 17e-8■■□□□ 12.8
PSEN1-225ENST00000560005 MDM4O15151 490 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 TNFSF14O43557 240 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 SYNCRIPO60506 623 aaKnown RBP21.31■■□□□ 1
PSEN1-225ENST00000560005 ARHGAP25P42331 645 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 ZNF132P52740 706 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 GNG11P61952 73 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 GEN1Q17RS7 908 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 KIF19Q2TAC6 998 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 TMEM270Q6UE05 265 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 UBR7Q8N806 425 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 SLC39A7Q92504 469 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 TNIP3Q96KP6 325 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 SMOQ99835 787 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 FBXO44Q9H4M3 255 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 CYLDQ9NQC7 956 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 CISHQ9NSE2 258 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 OSER1Q9NX31 292 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 THAP10Q9P2Z0 257 aaPredicted RBP21.31■■□□□ 1
PSEN1-225ENST00000560005 NOCTQ9UK39 431 aaKnown RBP21.31■■□□□ 1
PSEN1-225ENST00000560005 FBXO10Q9UK96 956 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 GUCA1BQ9UMX6 200 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 SNX11Q9Y5W9 270 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 TENM4Q6N022 2769 aa21.31■■□□□ 1
PSEN1-225ENST00000560005 IGLV3-19P01714 112 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 PAEPP09466 180 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 ACADMP11310 421 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 CCDC130P13994 396 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 AFF3P51826 1226 aaKnown RBP21.3■■□□□ 1
PSEN1-225ENST00000560005 ENPP2Q13822 863 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 PTPRNQ16849 979 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 DHRS13Q6UX07 377 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 ACOT1Q86TX2 421 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 FAM124AQ86V42 546 aa21.3■■□□□ 1
PSEN1-225ENST00000560005 SLC47A2Q86VL8 602 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms