RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RNF186Q9NXI6 227 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 GGT7Q9UJ14 662 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 NR2E3Q9Y5X4 410 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 CASP8AP2Q9UKL3 1982 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 I6L893 689 aaPredicted RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 IRAK2O43187 625 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 HNRNPCL1O60812 293 aaKnown RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 UNC5CO95185 931 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 OAZ2O95190 189 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 SLC5A3P53794 718 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 NCALDP61601 193 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 FAM189BP81408 668 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 EIF4EBP2Q13542 120 aaPredicted RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 PPP2R5DQ14738 602 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 NOMO2Q5JPE7 1267 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 MROH9Q5TGP6 573 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 PARP9Q8IXQ6 854 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 NDUFAF2Q8N183 169 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 ARHGAP18Q8N392 663 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 FAM193BQ96PV7 902 aaPredicted RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 SMOC2Q9H3U7 446 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 CASS4Q9NQ75 786 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 SRRDQ9UH36 339 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 MTO1Q9Y2Z2 717 aaKnown RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 COL4A4P53420 1690 aaPredicted RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 CCNCP24863 283 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 DSC1Q08554 894 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 SNCBQ16143 134 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 FAM182AQ5T1J6 154 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 GRTP1Q5TC63 336 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 NAPEPLDQ6IQ20 393 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 LRRC49Q8IUZ0 686 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 NPWQ8N729 165 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 DNAAF3Q8N9W5 541 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 TEKT5Q96M29 485 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 TSGA13Q96PP4 275 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 RAB3IPQ96QF0 476 aaPredicted RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 CPNE1Q99829 537 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 SEZ6LQ9BYH1 1024 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 CEP41Q9BYV8 373 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 SLC13A1Q9BZW2 595 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 ZCWPW1Q9H0M4 648 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 FBXO44Q9H4M3 255 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 NPHS2Q9NP85 383 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 SYBUQ9NX95 663 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 DONSONQ9NYP3 566 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 DCDC2Q9UHG0 476 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 VANGL2Q9ULK5 521 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 AAR2Q9Y312 384 aaKnown RBP11.56□□□□□ -0.56
CLPX-204ENST00000559152 RPS6KL1Q9Y6S9 549 aa11.56□□□□□ -0.56
CLPX-204ENST00000559152 ARHGAP42A6NI28 874 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 TNFRSF10BO14763 440 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 SYN3O14994 580 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 MGRN1O60291 552 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 GLRA3O75311 464 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 USP1O94782 785 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 GNRH1P01148 92 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 SRGAP2BP0DMP2 458 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 SLC2A3P11169 496 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 NQO1P15559 274 aaKnown RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 BMPR2Q13873 1038 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 KCTD11Q693B1 232 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 RWDD4Q6NW29 188 aaKnown RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 PACS1Q6VY07 963 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 NLRP9Q7RTR0 991 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 ERP27Q96DN0 273 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 CERS2Q96G23 380 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 C7orf26Q96N11 449 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 SERPINB11Q96P15 392 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 IL22Q9GZX6 179 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 ARHGEF3Q9NR81 526 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 F5H423 210 aaPredicted RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 UGT1A9O60656 530 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 AOC2O75106 756 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 ITGB1P05556 798 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 HOXC13P31276 330 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 GP5P40197 560 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 ELF3P78545 371 aaPredicted RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 NRG1Q02297 640 aaPredicted RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 CDK18Q07002 472 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 RIPK1Q13546 671 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 INSCQ1MX18 579 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 TIGD7Q6NT04 549 aaPredicted RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 ASRGL1Q7L266 308 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 TBC1D1Q86TI0 1168 aaPredicted RBP11.55□□□□□ -0.56
CLPX-204ENST00000559152 TMEM135Q86UB9 458 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 MON1AQ86VX9 555 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 RASSF3Q86WH2 238 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 NUDCD3Q8IVD9 361 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 COLGALT2Q8IYK4 626 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLPX-204ENST00000559152 SCAMP5Q8TAC9 235 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 E2F7Q96AV8 911 aa11.55□□□□□ -0.56
CLPX-204ENST00000559152 TBC1D31Q96DN5 1066 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms