RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 FAM71BQ8TC56 605 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ALG3Q92685 438 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 MYEOVQ96EZ4 313 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 WDR24Q96S15 920 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 PSMB7Q99436 277 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 TLR10Q9BXR5 811 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 CARD9Q9H257 536 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 RETREG1Q9H6L5 497 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 C8orf33Q9H7E9 229 aaPredicted RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 TRPV5Q9NQA5 729 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ARHGEF4Q9NR80 690 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 DNAJC17Q9NVM6 304 aaKnown RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 TMEM248Q9NWD8 314 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 GTSE1Q9NYZ3 720 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 DNAI1Q9UI46 699 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 FBXL21Q9UKT6 434 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 DUSP12Q9UNI6 340 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 PIAS3Q9Y6X2 628 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 hCG_1818297A0A087WSY0 165 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF487B1APH4 448 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 ARNTLO00327 626 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 CEP104O60308 925 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 CACNG3O60359 315 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 RAMP2O60895 175 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 PYGMP11217 842 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 ERCC2P18074 760 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 AMPD1P23109 780 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 ETFBP38117 255 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 EIF2DP41214 584 aaKnown RBP6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 CDKN2BP42772 138 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 SOX9P48436 509 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 DGKGP49619 791 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 IRAK1P51617 712 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 KDSRQ06136 332 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 DPYSQ14117 519 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 LLGL1Q15334 1064 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 PREPLQ4J6C6 727 aaPredicted RBP6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 ALFQ53S48 1182 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 TFDP3Q5H9I0 405 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 SYT10Q6XYQ8 523 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 NUDT18Q6ZVK8 323 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 SETD3Q86TU7 594 aaPredicted RBP6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 NLRP14Q86W24 1093 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 LZTR1Q8N653 840 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 PCDH19Q8TAB3 1148 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 TSC1Q92574 1164 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF592Q92610 1267 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 FAF2Q96CS3 445 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 MSANTD3Q96H12 275 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 PBKQ96KB5 322 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 RNF157Q96PX1 679 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 UHRF1Q96T88 793 aaPredicted RBP6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 HEMGNQ9BXL5 484 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 SLC2A11Q9BYW1 496 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 OSBPL8Q9BZF1 889 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 MUC3BQ9H195 1237 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 PRDM16Q9HAZ2 1276 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 SLC2A4RGQ9NR83 387 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 HEBP1Q9NRV9 189 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 KIAA1522Q9P206 1035 aaPredicted RBP6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 DEC1Q9P2X7 70 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 NEU3Q9UQ49 428 aa6.78□□□□□ -1.32
CHRNA3-204ENST00000559002 NCOR1O75376 2440 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 ILVBLA1L0T0 632 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 ARHGAP42A6NI28 874 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 C3orf70A6NLC5 250 aaPredicted RBP6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 WASH4PA8MWX3 477 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 ESPNB1AK53 854 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 SPECC1L-ADORA2AF8WAN1 911 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 DFFAO00273 331 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 MAN2B1O00754 1011 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 DCLK1O15075 740 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 FANCGO15287 622 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 CST8O60676 142 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 TULP3O75386 442 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 TJP3O95049 919 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 APODP05090 189 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 PABPC1P11940 636 aaKnown RBP6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 KRT10P13645 584 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 GLULP15104 373 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 TCP1P17987 556 aaKnown RBP6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 TGM2P21980 687 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 IL4RP24394 825 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 CXCR5P32302 372 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 CTHP32929 405 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 PTPN7P35236 360 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 CSKP41240 450 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 NDST2P52849 883 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 LMAN2Q12907 356 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 SLC12A1Q13621 1099 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 POLD3Q15054 466 aaPredicted RBP6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 MLF2Q15773 248 aaPredicted RBP6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 TAZQ16635 292 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 PARP15Q460N3 678 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 SLC44A4Q53GD3 710 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 DCAF12L1Q5VU92 463 aa6.77□□□□□ -1.33
CHRNA3-204ENST00000559002 RNF219Q5W0B1 726 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms