RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 FRMD8P1Q9BZ68 369 aaPredicted RBP18.59■□□□□ 0.57
CLPX-203ENST00000558958 HOMER3Q9NSC5 361 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 NDFIP2Q9NV92 336 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 DONSONQ9NYP3 566 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 DTLQ9NZJ0 730 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 WNT6Q9Y6F9 365 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 DOCK4Q8N1I0 1966 aa18.59■□□□□ 0.57
CLPX-203ENST00000558958 A0A1B0GVM2 712 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 TCAF2A6NFQ2 919 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 CCDC188H7C350 402 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 CLDN11O75508 207 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 SERPINB6P35237 376 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 MAPKAPK2P49137 400 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 C2orf54Q08AI8 447 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 NOMO1Q15155 1222 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 MPPE1Q53F39 396 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 MPP7Q5T2T1 576 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 PARM1Q6UWI2 310 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 VITQ6UXI7 678 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 ADGRG2Q8IZP9 1017 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 LZTR1Q8N653 840 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 ST13P5Q8NFI4 369 aaPredicted RBP18.58■□□□□ 0.57
CLPX-203ENST00000558958 OSCP1Q8WVF1 389 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 ELSPBP1Q96BH3 223 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 LRRC19Q9H756 370 aa18.58■□□□□ 0.57
CLPX-203ENST00000558958 DUS2Q9NX74 493 aaKnown RBP18.58■□□□□ 0.57
CLPX-203ENST00000558958 TYW5A2RUC4 315 aaKnown RBP18.58■□□□□ 0.56
CLPX-203ENST00000558958 RIOK3O14730 519 aaKnown RBP18.58■□□□□ 0.56
CLPX-203ENST00000558958 LIASO43766 372 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 TBL1XO60907 577 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 PHF2O75151 1096 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 FCHO2Q0JRZ9 810 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 LEXMQ3ZCV2 418 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 AFMIDQ63HM1 303 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 RNF43Q68DV7 783 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 DRICH1Q6PGQ1 229 aaPredicted RBP18.58■□□□□ 0.56
CLPX-203ENST00000558958 TPGS1Q6ZTW0 290 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 BZW1Q7L1Q6 419 aaKnown RBP18.58■□□□□ 0.56
CLPX-203ENST00000558958 MFSD6LQ8IWD5 586 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 UMODL1-AS1Q8N2C9 162 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 SLC35B2Q8TB61 432 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 FGF14Q92915 247 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 MAGOHBQ96A72 148 aaKnown RBP18.58■□□□□ 0.56
CLPX-203ENST00000558958 THG1LQ9NWX6 298 aaKnown RBP18.58■□□□□ 0.56
CLPX-203ENST00000558958 RAD54BQ9Y620 910 aa18.58■□□□□ 0.56
CLPX-203ENST00000558958 ECI2O75521 394 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 MAP3K6O95382 1288 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 OR1E1P30953 314 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 EML3Q32P44 896 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 FYB2Q5VWT5 728 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 MTSS1LQ765P7 747 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 TMEM25Q86YD3 366 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 ARHGAP12Q8IWW6 846 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 TP53INP2Q8IXH6 220 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 NETO2Q8NC67 525 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 LRRN4CLQ8ND94 238 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 DDI1Q8WTU0 396 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 IRF7Q92985 503 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 NKD2Q969F2 451 aaPredicted RBP18.57■□□□□ 0.56
CLPX-203ENST00000558958 ASIC4Q96FT7 647 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 OLFM3Q96PB7 478 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 KXD1Q9BQD3 176 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 PLA2G2FQ9BZM2 168 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 DDX47Q9H0S4 455 aaKnown RBP18.57■□□□□ 0.56
CLPX-203ENST00000558958 NOL6Q9H6R4 1146 aaKnown RBP18.57■□□□□ 0.56
CLPX-203ENST00000558958 SPHK2Q9NRA0 654 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 DNPEPQ9ULA0 475 aa18.57■□□□□ 0.56
CLPX-203ENST00000558958 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 ANHXE9PGG2 379 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 MCF2LO15068 1137 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 SLU7O95391 586 aaKnown RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 PENKP01210 267 aaPredicted RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 CYBBP04839 570 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 SP100P23497 879 aaPredicted RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 HOXD9P28356 352 aaPredicted RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 CHRNA3P32297 505 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 COILP38432 576 aaPredicted RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 IFNAR2P48551 515 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 FNTAP49354 379 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 NDST2P52849 883 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 EIF3EP60228 445 aaKnown RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 ZNF177Q13360 481 aaPredicted RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 SNX1Q13596 522 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 BYSLQ13895 437 aaKnown RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 SMAD2Q15796 467 aaKnown RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 TTC27Q6P3X3 843 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 RHBDF2Q6PJF5 856 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 BHMTQ93088 406 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 CELF6Q96J87 481 aaKnown RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 FAM83CQ9BQN1 747 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 PHF7Q9BWX1 381 aaPredicted RBP18.56■□□□□ 0.56
CLPX-203ENST00000558958 TBC1D30Q9Y2I9 924 aa18.56■□□□□ 0.56
CLPX-203ENST00000558958 NCAM2O15394 837 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 LUC7L3O95232 432 aaKnown RBP18.55■□□□□ 0.56
CLPX-203ENST00000558958 RBP3P10745 1247 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 PSMC3P17980 439 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 GALNT2Q10471 571 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 XRCC4Q13426 336 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 HTR4Q13639 388 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 PDK1Q15118 436 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms