RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 NAALADL1Q9UQQ1 740 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 B3GNT3Q9Y2A9 372 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 GDAQ9Y2T3 454 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 COPG1Q9Y678 874 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 CYP46A1Q9Y6A2 500 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 RPS6KL1Q9Y6S9 549 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 SCINQ9Y6U3 715 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ARHGEF17Q96PE2 2063 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 SH2D7A6NKC9 451 aaPredicted RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 HMGB1P1B2RPK0 211 aaPredicted RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 PRYO14603 147 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 TNPO2O14787 897 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 IKBKBO14920 756 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SYN3O14994 580 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 LDLRAD4O15165 306 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 MPPED1O15442 326 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 DOK2O60496 412 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 TSPAN3O60637 253 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 EXOC3O60645 756 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 GJB3O75712 270 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 NXPH3O95157 252 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 F9P00740 461 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ALDOAP04075 364 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 WEE2P0C1S8 567 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ARSAP15289 507 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 DRD4P21917 467 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 PRPH2P23942 346 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 PSMC2P35998 433 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 MPLP40238 635 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 PNPLA4P41247 253 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 STAT6P42226 847 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 CASP2P42575 452 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 PTPN9P43378 593 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 PCP4P48539 62 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 MCM2P49736 904 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 VPS41P49754 854 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 CCR9P51686 369 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 JAK3P52333 1124 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 COPB1P53618 953 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 EIF5P55010 431 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 SLC37A1P57057 533 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 EEFSECP57772 596 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 WDR5P61964 334 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 RPP30P78346 268 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 TLE3Q04726 772 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 CCDC15Q0P6D6 951 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 FOXI1Q12951 378 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 THOC5Q13769 683 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 ERV3-1Q14264 604 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 MFSD13AQ14CX5 517 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 AP5B1Q2VPB7 878 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 TBRG1Q3YBR2 411 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 FBXO43Q4G163 708 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 RUNDC3AQ59EK9 446 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ZNF667Q5HYK9 610 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ABHD17BQ5VST6 288 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 LIPMQ5VYY2 423 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 FAM205BPQ63HN1 556 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 KAZNQ674X7 775 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ITPRIPL1Q6GPH6 555 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 NAPEPLDQ6IQ20 393 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ARMC6Q6NXE6 501 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 WDR93Q6P2C0 686 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 CFAP161Q6P656 301 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 MTHFD1LQ6UB35 978 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 DSTYKQ6XUX3 929 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 PARS2Q7L3T8 475 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 RTL10Q7L3V2 364 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SCN4BQ8IWT1 228 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ADGRF3Q8IZF5 1079 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 LINC01465Q8N7H1 131 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 C12orf76Q8N812 135 aaPredicted RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 TSPYL6Q8N831 410 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 OR52L2PQ8NGH6 319 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 RP9Q8TA86 221 aaKnown RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 ACTRT2Q8TDY3 377 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ADAMTS18Q8TE60 1221 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 C2CD4CQ8TF44 421 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 GLMPQ8WWB7 406 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 AKAP1Q92667 903 aaKnown RBP eCLIP1.81□□□□□ -2.12
USP3-209ENST00000558925 PERPQ96FX8 193 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 C7orf26Q96N11 449 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SNX18Q96RF0 628 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 EYA3Q99504 573 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 FUZQ9BT04 418 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 THAP7Q9BT49 309 aaPredicted RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.81□□□□□ -2.12
USP3-209ENST00000558925 CINPQ9BW66 212 aaPredicted RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 FSD1LQ9BXM9 530 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 CIPCQ9C0C6 399 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SLC32A1Q9H598 525 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 JMJD4Q9H9V9 463 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SEMA4BQ9NPR2 832 aaPredicted RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 IL17RBQ9NRM6 502 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 KRT84Q9NSB2 600 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 TBC1D22BQ9NU19 505 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SERTAD4Q9NUC0 356 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 TMLHEQ9NVH6 421 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.81□□□□□ -2.12
USP3-209ENST00000558925 ASNSD1Q9NWL6 643 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms