RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 E2F5Q15329 346 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ALFQ53S48 1182 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 EFHC2Q5JST6 749 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ADIPOR2Q86V24 386 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 CAMKK1Q8N5S9 505 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 CYB5D2Q8WUJ1 264 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 CTNNBL1Q8WYA6 563 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 PACSIN1Q9BY11 444 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 OSBPL2Q9H1P3 480 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 POLMQ9NP87 494 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 INTS6Q9UL03 887 aaKnown RBP12.73□□□□□ -0.37
SMAD3-205ENST00000558428 R4GN57 208 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 SPAG17Q6Q759 2223 aa12.73□□□□□ -0.37
SMAD3-205ENST00000558428 SDK1Q7Z5N4 2213 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 IGLV3-10A0A075B6K4 115 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 DRGXA6NNA5 263 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 WASH3PC4AMC7 463 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 ALDH1A2O94788 518 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 H2AFZP0C0S5 128 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 CDC25BP30305 580 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 CSKP41240 450 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 IL12RB1P42701 662 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 NUMBP49757 651 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 AIF1P55008 147 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 OXCT1P55809 520 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 NRG1Q02297 640 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-205ENST00000558428 SCAPQ12770 1279 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 SLC12A1Q13621 1099 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 PLEKHG6Q3KR16 790 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 FNDC3BQ53EP0 1204 aaKnown RBP12.72□□□□□ -0.37
SMAD3-205ENST00000558428 PITRM1Q5JRX3 1037 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 ANO7Q6IWH7 933 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
SMAD3-205ENST00000558428 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 H2AFVQ71UI9 128 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 TFAP2DQ7Z6R9 452 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 LONP2Q86WA8 852 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 ZBTB44Q8NCP5 570 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF564Q8TBZ8 553 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-205ENST00000558428 NELL1Q92832 810 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 TTC17Q96AE7 1141 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 ERLEC1Q96DZ1 483 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 BTBD6Q96KE9 485 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 GABRG3Q99928 467 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 MAGEB5Q9BZ81 275 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 CTTNBP2NLQ9P2B4 639 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 PPARGC1AQ9UBK2 798 aaKnown RBP12.72□□□□□ -0.37
SMAD3-205ENST00000558428 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 ANAPC7Q9UJX3 599 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 FZD10Q9ULW2 581 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 PLA2G4CQ9UP65 541 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 RAD54BQ9Y620 910 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 STON1Q9Y6Q2 735 aa12.72□□□□□ -0.37
SMAD3-205ENST00000558428 MUC22E2RYF6 1773 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-205ENST00000558428 USP34Q70CQ2 3546 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 TCRBV21S2A2A0A5A6 115 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 FAM72CH0Y354 149 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 AXIN1O15169 862 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 PRPSAP2O60256 369 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 LRIG2O94898 1065 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 ASLP04424 464 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 RHOCP08134 193 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 DLDP09622 509 aaKnown RBP12.71□□□□□ -0.37
SMAD3-205ENST00000558428 MZF1P28698 734 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-205ENST00000558428 MIPP30301 263 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 NBL1P41271 181 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 PIGHQ14442 188 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-205ENST00000558428 STARD3Q14849 445 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 ARTNQ5T4W7 220 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 FAM72AQ5TYM5 149 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 MANEALQ5VSG8 457 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 FAM72DQ6L9T8 149 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 FAM72BQ86X60 149 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 APCDD1Q8J025 514 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 PYROXD2Q8N2H3 581 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 ARFGAP1Q8N6T3 406 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 SPC24Q8NBT2 197 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 OR52K2Q8NGK3 314 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 TBC1D31Q96DN5 1066 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 PANX2Q96RD6 677 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 PPP1R9BQ96SB3 815 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 NCAPGQ9BPX3 1015 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 BCCIPQ9P287 314 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMAD3-205ENST00000558428 UVRAGQ9P2Y5 699 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 EBF1Q9UH73 591 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 IP6K2Q9UHH9 426 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 TBC1D30Q9Y2I9 924 aa12.71□□□□□ -0.37
SMAD3-205ENST00000558428 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 A0A1W2PQF6 199 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 MYO1FO00160 1098 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 CREB3O43889 395 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms