RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TMOD4Q9NZQ9 345 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 FOXJ2Q9P0K8 574 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 CD207Q9UJ71 328 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 TBC1D30Q9Y2I9 924 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 KNSTRNQ9Y448 316 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 DOPEY1Q5JWR5 2465 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 WDFY3Q8IZQ1 3526 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 MYO9AB2RTY4 2548 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 SRRM3A6NNA2 597 aaPredicted RBP6.7□□□□□ -1.34
RTF1-204ENST00000558117 ISM1B1AKI9 464 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 hCG_1984214I3L0E3 225 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 STRNO43815 780 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 ENTPD3O75355 529 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 CSF1RP07333 972 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 RHOP08100 348 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 PDHA1P08559 390 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 ATXN1LP0C7T5 689 aaKnown RBP6.7□□□□□ -1.34
RTF1-204ENST00000558117 AKR1A1P14550 325 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 PXNP49023 591 aaPredicted RBP6.7□□□□□ -1.34
RTF1-204ENST00000558117 RARRES1P49788 294 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 LOXL3P58215 753 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 KRT24Q2M2I5 525 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 ZIK1Q3SY52 487 aaPredicted RBP6.7□□□□□ -1.34
RTF1-204ENST00000558117 KIAA0895LQ68EN5 471 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 GRASPQ7Z6J2 395 aaPredicted RBP6.7□□□□□ -1.34
RTF1-204ENST00000558117 SESTD1Q86VW0 696 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 MICU3Q86XE3 530 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 FAM136AQ96C01 138 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 SUCLG2Q96I99 432 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 PDLIM2Q96JY6 352 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 MSLNLQ96KJ4 702 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 MESP1Q9BRJ9 268 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 ALG8Q9BVK2 526 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 IDI2Q9BXS1 227 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 LRRC27Q9C0I9 530 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 MS4A7Q9GZW8 240 aaPredicted RBP6.7□□□□□ -1.34
RTF1-204ENST00000558117 TRPV6Q9H1D0 765 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 PRDM16Q9HAZ2 1276 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 COL20A1Q9P218 1284 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 SLC17A6Q9P2U8 582 aa6.7□□□□□ -1.34
RTF1-204ENST00000558117 MRPS17Q9Y2R5 130 aaKnown RBP6.7□□□□□ -1.34
RTF1-204ENST00000558117 PPM1DO15297 605 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 PI15O43692 258 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 MGEA5O60502 916 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 PEX14O75381 377 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 GNALP38405 381 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 GRIA3P42263 894 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 MAPK10P53779 464 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 HYAL1Q12794 435 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 TEDDM1Q5T9Z0 273 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 DCAF12L1Q5VU92 463 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 SFRP4Q6FHJ7 346 aaPredicted RBP6.69□□□□□ -1.34
RTF1-204ENST00000558117 ZDHHC24Q6UX98 284 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 ADGRG3Q86Y34 549 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 OR56A3Q8NH54 315 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 NELL1Q92832 810 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 NELL2Q99435 816 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 RAD9AQ99638 391 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 PTDSS2Q9BVG9 487 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 PHF7Q9BWX1 381 aaPredicted RBP6.69□□□□□ -1.34
RTF1-204ENST00000558117 ZNF518BQ9C0D4 1074 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 AS3MTQ9HBK9 375 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 KLC4Q9NSK0 619 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 HYPKQ9NX55 129 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 SERTAD3Q9UJW9 196 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 SSX2IPQ9Y2D8 614 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 GRIN2DO15399 1336 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 ZNF236Q9UL36 1845 aa6.69□□□□□ -1.34
RTF1-204ENST00000558117 WDR27A2RRH5 827 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 C19orf81C9J6K1 198 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 OVOL3O00110 214 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 MGST3O14880 152 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 GJB5O95377 273 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 ERBB2P04626 1255 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 CLK3P49761 638 aaKnown RBP6.68□□□□□ -1.34
RTF1-204ENST00000558117 CACNA2D1P54289 1103 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 ELLP55199 621 aaPredicted RBP6.68□□□□□ -1.34
RTF1-204ENST00000558117 RRP1P56182 461 aaKnown RBP6.68□□□□□ -1.34
RTF1-204ENST00000558117 WNT3P56703 355 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 RAB32Q13637 225 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 COBLL1Q53SF7 1204 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 ARHGAP40Q5TG30 622 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 RD3Q7Z3Z2 195 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 MORC4Q8TE76 937 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 TTC17Q96AE7 1141 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 FKBP10Q96AY3 582 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 NMD3Q96D46 503 aaKnown RBP6.68□□□□□ -1.34
RTF1-204ENST00000558117 PBKQ96KB5 322 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 RPGRIP1Q96KN7 1286 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 SARGQ9BW04 601 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 ZNF287Q9HBT7 754 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 DKK3Q9UBP4 350 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 NDRG4Q9ULP0 352 aaKnown RBP6.68□□□□□ -1.34
RTF1-204ENST00000558117 RALGAPA2Q2PPJ7 1873 aa6.68□□□□□ -1.34
RTF1-204ENST00000558117 DOCK2Q92608 1830 aa6.67□□□□□ -1.34
RTF1-204ENST00000558117 SPTAN1Q13813 2472 aaKnown RBP6.67□□□□□ -1.34
RTF1-204ENST00000558117 H3BNC9 293 aa6.67□□□□□ -1.34
RTF1-204ENST00000558117 SLC30A4O14863 429 aa6.67□□□□□ -1.34
RTF1-204ENST00000558117 CTAGE5O15320 804 aa6.67□□□□□ -1.34
RTF1-204ENST00000558117 LINC01565O15544 149 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms