RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SLCO3A1Q9UIG8 710 aa16.51■□□□□ 0.23
SCFD1-224ENST00000557713 HOOK1Q9UJC3 728 aaKnown RBP16.51■□□□□ 0.23
SCFD1-224ENST00000557713 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
SCFD1-224ENST00000557713 FZD4Q9ULV1 537 aa16.51■□□□□ 0.23
SCFD1-224ENST00000557713 ATRXP46100 2492 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 A0A1B0GTQ1 180 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 EDDM13A0A1B0GTR0 161 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 A0A1W2PP55 124 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 FAM47DPA6NHR8 397 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 WNT1P04628 370 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 BMP6P22004 513 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 SLC8A1P32418 973 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 ACADSBP45954 432 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 C21orf59P57076 290 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 KCNH2Q12809 1159 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 EIF4EBP2Q13542 120 aaPredicted RBP16.5■□□□□ 0.23
SCFD1-224ENST00000557713 CDH18Q13634 790 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 KCNJ12Q14500 433 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 SMAD1Q15797 465 aaKnown RBP16.5■□□□□ 0.23
SCFD1-224ENST00000557713 DENND1BQ6P3S1 775 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 ADAT2Q7Z6V5 191 aaKnown RBP16.5■□□□□ 0.23
SCFD1-224ENST00000557713 MMAAQ8IVH4 418 aaKnown RBP16.5■□□□□ 0.23
SCFD1-224ENST00000557713 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
SCFD1-224ENST00000557713 TRIM59Q8IWR1 403 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 APCDD1Q8J025 514 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 OR2T34Q8NGX1 318 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 FAM149B1Q96BN6 582 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 SLC6A18Q96N87 628 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 OMDQ99983 421 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 ACE2Q9BYF1 805 aaPredicted RBP16.5■□□□□ 0.23
SCFD1-224ENST00000557713 ST7Q9NRC1 585 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 CYTH4Q9UIA0 394 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 RAXQ9Y2V3 346 aa16.5■□□□□ 0.23
SCFD1-224ENST00000557713 TRABD2BA6NFA1 517 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 LRRC72A6NJI9 287 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 PLXNA2O75051 1894 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 RNASEH2AO75792 299 aaKnown RBP16.49■□□□□ 0.23
SCFD1-224ENST00000557713 MOCS3O95396 460 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 MOCS2O96007 188 aaPredicted RBP16.49■□□□□ 0.23
SCFD1-224ENST00000557713 IGLV3-25P01717 112 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 TACR2P21452 398 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 CCR5P51681 352 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 MARSP56192 900 aaKnown RBP16.49■□□□□ 0.23
SCFD1-224ENST00000557713 ECT2LQ008S8 904 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 IL9RQ01113 521 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 SHBQ15464 509 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 MEA1Q16626 185 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 COL28A1Q2UY09 1125 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 ZC3H12AQ5D1E8 599 aaKnown RBP16.49■□□□□ 0.23
SCFD1-224ENST00000557713 PRAMEF14Q5SWL7 426 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 TMEM110Q86TL2 294 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 LGI2Q8N0V4 545 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 AADATQ8N5Z0 425 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 NELFBQ8WX92 580 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 PTPRN2Q92932 1015 aa16.49■□□□□ 0.23
SCFD1-224ENST00000557713 ELF4Q99607 663 aaPredicted RBP16.49■□□□□ 0.23
SCFD1-224ENST00000557713 A0A1W2PR77 199 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 CAPN9O14815 690 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 WNT9AO14904 365 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 TRUB2O95900 331 aaKnown RBP16.48■□□□□ 0.23
SCFD1-224ENST00000557713 APOEP02649 317 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 GOT1P17174 413 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 YWHAZP63104 245 aaKnown RBP16.48■□□□□ 0.23
SCFD1-224ENST00000557713 RAP1GAP2Q684P5 730 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 KLHL10Q6JEL2 608 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 PDZD3Q86UT5 571 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 STK40Q8N2I9 435 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 ZNF606Q8WXB4 792 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 SKA1Q96BD8 255 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 BTN2A3PQ96KV6 586 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 RPL10LQ96L21 214 aaKnown RBP16.48■□□□□ 0.23
SCFD1-224ENST00000557713 TRIM62Q9BVG3 475 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 INTS2Q9H0H0 1204 aaKnown RBP16.48■□□□□ 0.23
SCFD1-224ENST00000557713 POPDC2Q9HBU9 364 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 FTSJ1Q9UET6 329 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 BAHCC1Q9P281 2608 aa16.48■□□□□ 0.23
SCFD1-224ENST00000557713 BICDL2A1A5D9 508 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 FAM149AA5PLN7 773 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 KCNU1A8MYU2 1149 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 E5RJQ4 531 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 GNA14O95837 355 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 ADH1BP00325 375 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
SCFD1-224ENST00000557713 KRT5P13647 590 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 C5AR1P21730 350 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 CD38P28907 300 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 PITX1P78337 314 aaPredicted RBP16.47■□□□□ 0.23
SCFD1-224ENST00000557713 CYP4F3Q08477 520 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 SLC12A1Q13621 1099 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 MORC3Q14149 939 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 INAVAQ3KP66 663 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 DHRS13Q6UX07 377 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 SND1Q7KZF4 910 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCFD1-224ENST00000557713 CHSY1Q86X52 802 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 GATAD2AQ86YP4 633 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 SAP25Q8TEE9 199 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 HNRNPLLQ8WVV9 542 aaKnown RBP16.47■□□□□ 0.23
SCFD1-224ENST00000557713 PRMT1Q99873 361 aaKnown RBP16.47■□□□□ 0.23
SCFD1-224ENST00000557713 THAP9Q9H5L6 903 aa16.47■□□□□ 0.23
SCFD1-224ENST00000557713 UBE2TQ9NPD8 197 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms