RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 SPARCP09486 303 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 LYL1P12980 280 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 ACP5P13686 325 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 ATP6V1B1P15313 513 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 CD19P15391 556 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 TLX1P31314 330 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 SLC5A2P31639 672 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 ATP6V1E1P36543 226 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 PBX3P40426 434 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 FOLR3P41439 243 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 LILRA4P59901 499 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 TGFB2P61812 414 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 TMF1P82094 1093 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 CALD1Q05682 793 aaKnown RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 KRTAP1-1Q07627 177 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 AP1B1Q10567 949 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 EPS8Q12929 822 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 PTPRRQ15256 657 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 CSRP2Q16527 193 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 KYNUQ16719 465 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 GEN1Q17RS7 908 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 B3GNTL1Q67FW5 361 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 GPR139Q6DWJ6 353 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 DGAT2L7PQ6IED9 249 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 TTI2Q6NXR4 508 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 KIAA1324Q6UXG2 1013 aaKnown RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 SLC30A10Q6XR72 485 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 CLEC17AQ6ZS10 378 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 PLPPR4Q7Z2D5 763 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 MRGPREQ86SM8 312 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 EPHX4Q8IUS5 362 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 ULK2Q8IYT8 1036 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 FRMD1Q8N878 549 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 USP38Q8NB14 1042 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 TOR1AIP2Q8NFQ8 470 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 CAGE1Q8TC20 777 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 BPIFB1Q8TDL5 484 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 TMEM171Q8WVE6 324 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 NEU4Q8WWR8 484 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 SECISBP2LQ93073 1101 aaKnown RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 VPS33AQ96AX1 596 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 FAM136AQ96C01 138 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 FBXL20Q96IG2 436 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 LRIG1Q96JA1 1093 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 FEM1CQ96JP0 617 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 FAM227BQ96M60 508 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 WDFY2Q96P53 400 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 LENG8Q96PV6 779 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 EYA3Q99504 573 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 AIFM2Q9BRQ8 373 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 FAM129AQ9BZQ8 928 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 PDCL3Q9H2J4 239 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 RANBP17Q9H2T7 1088 aaKnown RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 SMOC2Q9H3U7 446 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 OPA3Q9H6K4 179 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 MMRN2Q9H8L6 949 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 UNKLQ9H9P5 680 aaKnown RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 ERVK-5Q9HDB9 667 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 ARGLU1Q9NWB6 273 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 HCFC1R1Q9NWW0 138 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 ETAA1Q9NY74 926 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 EHD3Q9NZN3 535 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 MTRRQ9UBK8 725 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 SLC25A10Q9UBX3 287 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 CNOT7Q9UIV1 285 aaKnown RBP3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 PACSIN3Q9UKS6 424 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 SARDHQ9UL12 918 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 TMCC3Q9ULS5 477 aa3.4□□□□□ -1.87
HMGB1P14-201ENST00000557424 CENPVL1A0A0U1RR11 272 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 URADA6NGE7 173 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 FAM90A7PA6NKC0 464 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 FAM90A22PA8MWA6 464 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 FAM90A12PA8MX19 464 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 FAM90A23PA8MXZ1 464 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 BTBD18B2RXH4 712 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 H0Y626 953 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 M0QZQ0 153 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 YY2O15391 372 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 SLC16A3O15427 465 aaKnown RBP3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 RGS10O43665 173 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 CBFA2T3O75081 653 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 TSPAN9O75954 239 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 SUN1O94901 812 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 PDE8BO95263 885 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 ESRRBO95718 433 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 TTLL1O95922 423 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 URODP06132 367 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 ATP5BP06576 529 aaKnown RBP3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 EGR2P11161 476 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 PSMA3P25788 255 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 NFKBIAP25963 317 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 EPHA3P29320 983 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 HTR7P34969 479 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 CLCN2P51788 898 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 TPTEP56180 551 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 HSD17B7P56937 341 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 SUMO2P61956 95 aaKnown RBP3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 SLC25A3Q00325 362 aa3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 RNASELQ05823 741 aaKnown RBP3.39□□□□□ -1.87
HMGB1P14-201ENST00000557424 AIMP1Q12904 312 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms