RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CCR1P32246 355 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 KRT9P35527 623 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 SNX16P57768 344 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 FAM193AP78312 1265 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 ECT2LQ008S8 904 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 SFSWAPQ12872 951 aaKnown RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 MTA1Q13330 715 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 EIF4EBP2Q13542 120 aaPredicted RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 SLC12A1Q13621 1099 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 ZNF423Q2M1K9 1284 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 RABGAP1LQ5R372 815 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 FAM183BPQ6ZVS7 135 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 DHX40Q8IX18 779 aaKnown RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 DEFB106AQ8N104 65 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 C1orf131Q8NDD1 294 aaKnown RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 C1orf216Q8TAB5 229 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 RNF34Q969K3 372 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 BIRC7Q96CA5 298 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 CAMK1GQ96NX5 476 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 TMEM121BQ9BXQ6 578 aaPredicted RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 PABPC3Q9H361 631 aaKnown RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 MTG2Q9H4K7 406 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 GAREM1Q9H706 876 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 OSGEPQ9NPF4 335 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 COX16Q9P0S2 106 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 DACH1Q9UI36 760 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 DNAJC12Q9UKB3 198 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 AJAP1Q9UKB5 411 aaPredicted RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 PCDHB9Q9Y5E1 797 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 EDDM13A0A1B0GTR0 161 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 A0A1B0GVM2 712 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 TARSL2A2RTX5 802 aaKnown RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 TMEM8BA6NDV4 472 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 TCAF2A6NFQ2 919 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 DAB1O75553 588 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 FSBPO95073 299 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 PRKCSHP14314 528 aaPredicted RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 CTSOP43234 321 aaPredicted RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 GRIA4P48058 902 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 TEAD4Q15561 434 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 TRIP6Q15654 476 aaKnown RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 CST6Q15828 149 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 DPCR1Q3MIW9 517 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 OR6B2Q6IFH4 312 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 OLFML1Q6UWY5 402 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 C11orf57Q6ZUT1 292 aaPredicted RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 CCAR2Q8N163 923 aaKnown RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 WDTC1Q8N5D0 677 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 GANCQ8TET4 914 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 PRMT1Q99873 361 aaKnown RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 NDST4Q9H3R1 872 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 TM7SF3Q9NS93 570 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 FBXL12Q9NXK8 326 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 FNDC3AQ9Y2H6 1198 aaKnown RBP14.63□□□□□ -0.07
SNX6-210ENST00000557341 DMXL2Q8TDJ6 3036 aa14.63□□□□□ -0.07
SNX6-210ENST00000557341 CHD5Q8TDI0 1954 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 A0A1B0GVT2 93 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 TTC34A8MYJ7 566 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 MID1O15344 667 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 GRAP2O75791 330 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 ERBB2P04626 1255 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 PNMA6AP0CW24 399 aaPredicted RBP14.62□□□□□ -0.07
SNX6-210ENST00000557341 CD27P26842 260 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 ERCC5P28715 1186 aaPredicted RBP14.62□□□□□ -0.07
SNX6-210ENST00000557341 NNMTP40261 264 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 CSNK1EP49674 416 aaKnown RBP14.62□□□□□ -0.07
SNX6-210ENST00000557341 OXCT1P55809 520 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 BNC1Q01954 994 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 HLA-BQ31612 363 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 PTPN20Q4JDL3 420 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 VWA3BQ502W6 1294 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 C9orf64Q5T6V5 341 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 SLC26A9Q7LBE3 791 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 SLC47A2Q86VL8 602 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 CIR1Q86X95 450 aaPredicted RBP14.62□□□□□ -0.07
SNX6-210ENST00000557341 ZDHHC17Q8IUH5 632 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 APCDD1Q8J025 514 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 GATA6Q92908 595 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 TUBGCP2Q9BSJ2 902 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 NUP62CLQ9H1M0 184 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 IL21RQ9HBE5 538 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 TM9SF3Q9HD45 589 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 KLK13Q9UKR3 277 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 PCOLCE2Q9UKZ9 415 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 FZD4Q9ULV1 537 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 SLCO1B1Q9Y6L6 691 aa14.62□□□□□ -0.07
SNX6-210ENST00000557341 A0A1W2PP55 124 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 FAM47DPA6NHR8 397 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 FOXN3O00409 490 aaPredicted RBP14.61□□□□□ -0.07
SNX6-210ENST00000557341 FLRT2O43155 660 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 RNASEH2AO75792 299 aaKnown RBP14.61□□□□□ -0.07
SNX6-210ENST00000557341 ADH1BP00325 375 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 IGHV4-34P06331 123 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 FTH1P19P0C7X4 201 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 PDGFRAP16234 1089 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 CLCN1P35523 988 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 PSMD8P48556 350 aa14.61□□□□□ -0.07
SNX6-210ENST00000557341 STK19P49842 368 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms