RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 FGD3Q5JSP0 725 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 WDR59Q6PJI9 974 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF548Q8NEK5 533 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 PHF10Q8WUB8 498 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 PIGSQ96S52 555 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ACTR8Q9H981 624 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 SETD4Q9NVD3 440 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 DNAJC11Q9NVH1 559 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 H3BNH8 94 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ORC5O43913 435 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PLIN3O60664 434 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 AKR1B1P15121 316 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 NET1Q7Z628 596 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ANKRD7Q92527 254 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 CLK4Q9HAZ1 481 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 FAM217BQ9NTX9 383 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 KCNK4Q9NYG8 393 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 AFF2P51816 1311 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 SLC25A12O75746 678 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 LRIG2O94898 1065 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 HLA-DQA2P01906 255 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PRH1P02810 166 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ATF4P18848 351 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 NEK3P51956 506 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PITPNAQ00169 270 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 FAM111AQ96PZ2 611 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 AIF1LQ9BQI0 150 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 DDX18Q9NVP1 670 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 GJA1P17302 382 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PLCL1Q15111 1095 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 NECAB2Q7Z6G3 386 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PGBD3Q8N328 593 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF607Q96SK3 696 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 DCUN1D5Q9BTE7 237 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ARL15Q9NXU5 204 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 INVSQ9Y283 1065 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 MYH7BA7E2Y1 1941 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 URADA6NGE7 173 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 TPD52L2O43399 206 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 FUT11Q495W5 492 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ATCAYQ86WG3 371 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 BBS4Q96RK4 519 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 KCTD10Q9H3F6 313 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 FAM25EA8MYX2 175 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 RSL1D1O76021 490 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 MOCS2O96007 188 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 BARHL2Q9NY43 387 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 SRP68Q9UHB9 627 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ABCG2Q9UNQ0 655 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 GNRH1P01148 92 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ATP1A3P13637 1013 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ADAM8P78325 824 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 XRRA1Q6P2D8 792 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 C11orf96Q7Z7L8 435 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 C11orf74Q86VG3 221 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 IPMKQ8NFU5 416 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ATL1Q8WXF7 558 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 FIG4Q92562 907 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 RFKQ969G6 155 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 APOL2Q9BQE5 337 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ACE2Q9BYF1 805 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PCDHA10Q9Y5I2 948 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PPEF1O14829 653 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ZC3H11AO75152 810 aaKnown RBP eCLIP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 RLN2P04090 185 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 LCP1P13796 627 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 NCOA4Q13772 614 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 R3HCC1LQ7Z5L2 792 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ANKS1AQ92625 1134 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 GORASP1Q9BQQ3 440 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 HAO1Q9UJM8 370 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ARHGEF40Q8TER5 1519 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ANKRD65E5RJM6 399 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ODC1P11926 461 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 POLR2LP62875 67 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PNMA8BQ9ULN7 279 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 CORO1CQ9ULV4 474 aaPredicted RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ANGPT4Q9Y264 503 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 NCKAP1Q9Y2A7 1128 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 CAMSAP1Q5T5Y3 1602 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 GRAP2O75791 330 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 MTAPQ13126 283 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 ARCQ7LC44 396 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 GSPT2Q8IYD1 628 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PNPT1Q8TCS8 783 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 AGAP3Q96P47 875 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 TBC1D24Q9ULP9 559 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 DHRS7Q9Y394 339 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 H7C4K7 107 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 CYB5AP00167 134 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 UMPSP11172 480 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 PTH1RQ03431 593 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 FASTKQ14296 549 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 TCEAL6Q6IPX3 200 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM159Q96B96 161 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 RNF145Q96MT1 663 aa8.99□□□□□ -0.97
SYNE3-205ENST00000557275 SUCOQ9UBS9 1254 aaKnown RBP8.99□□□□□ -0.97
SYNE3-205ENST00000557275 RGS8P57771 180 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms