RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 COCHO43405 550 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 TBX1O43435 398 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 OPA1O60313 960 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 EGFP01133 1207 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 CCDC130P13994 396 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 GBP1P32455 592 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 FNTBP49356 437 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 MXI1P50539 228 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 MAP3K7CLP57077 242 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 ZNF460Q14592 562 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 NXNQ6DKJ4 435 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 PPP4R4Q6NUP7 873 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 FOXR2Q6PJQ5 311 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 WDR5BQ86VZ2 330 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 DCLK2Q8N568 766 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 WHAMMQ8TF30 809 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 SEMA4DQ92854 862 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 EEF2KMTQ96G04 330 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 TWNKQ96RR1 684 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 ZNF700Q9H0M5 742 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 FAM49BQ9NUQ9 324 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 SMPD4Q9NXE4 827 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 CFAP97Q9P2B7 532 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 HMGXB4Q9UGU5 601 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 SMG5Q9UPR3 1016 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 SLC8A2Q9UPR5 921 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 SCML2Q9UQR0 700 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 COQ4Q9Y3A0 265 aa10.33□□□□□ -0.76
HNRNPC-228ENST00000557033 A0A0A0MRY4 1105 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 FANCGO15287 622 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 CD58P19256 250 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 ADORA2BP29275 332 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 EIF2DP41214 584 aaKnown RBP10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 ID4P47928 161 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 SIM2Q14190 667 aaPredicted RBP10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 MLC1Q15049 377 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 ZBTB37Q5TC79 503 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 LAIR1Q6GTX8 287 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 CLEC20AQ6ZU45 233 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 SYT13Q7L8C5 426 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 ZBTB46Q86UZ6 589 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 HID1Q8IV36 788 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 KIAA2013Q8IYS2 634 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 ZNF276Q8N554 614 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 KLHDC7BQ96G42 594 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 TMEM176AQ96HP8 235 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 HEXIM2Q96MH2 286 aaKnown RBP10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 TTC1Q99614 292 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 DUSP16Q9BY84 665 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 NACA2Q9H009 215 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 CISHQ9NSE2 258 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 ARMCX3Q9UH62 379 aaPredicted RBP10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 GMEB2Q9UKD1 530 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 TRHDEQ9UKU6 1024 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 SH3BP1Q9Y3L3 701 aa10.32□□□□□ -0.76
HNRNPC-228ENST00000557033 CFAP54Q96N23 3096 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 HHLA1C9JL84 531 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 PMM2O15305 246 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 DLX3O60479 287 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 TLR5O60602 858 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 LRP3O75074 770 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 CLEC3AO75596 197 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 RETP07949 1114 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 JMJD7P0C870 316 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ACO1P21399 889 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 SDHBP21912 280 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ATP5C1P36542 298 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 OPRD1P41143 372 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 GAD2Q05329 585 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 DMWDQ09019 674 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 GAB4Q2WGN9 574 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 PREPLQ4J6C6 727 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 CBWD6Q4V339 395 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 C4orf46Q504U0 113 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 DCAF17Q5H9S7 520 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 CBWD3Q5JTY5 395 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 CBWD5Q5RIA9 395 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ARHGAP17Q68EM7 881 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 KLHDC10Q6PID8 442 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 RHBDF2Q6PJF5 856 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 HTR3DQ70Z44 454 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ADAT2Q7Z6V5 191 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 TADA2BQ86TJ2 420 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 CNTD1Q8N815 330 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 NUDT8Q8WV74 236 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ERCC4Q92889 916 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ACDQ96AP0 544 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 PNKPQ96T60 521 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ATP13A2Q9NQ11 1180 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 C2orf42Q9NWW7 574 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 MAN1B1Q9UKM7 699 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 KIAA1257Q9ULG3 409 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 ZNF451Q9Y4E5 1061 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 MYH10P35580 1976 aa10.31□□□□□ -0.76
HNRNPC-228ENST00000557033 BICDL2A1A5D9 508 aa10.3□□□□□ -0.76
HNRNPC-228ENST00000557033 TRIM49BA6NDI0 452 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms