RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SLC4A7Q9Y6M7 1214 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 SCN1AP35498 2009 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 CCDC160A6NGH7 325 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 CASQ2O14958 399 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 CHRNGP07510 517 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 PDGFRBP09619 1106 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 SMIM18P0DKX4 95 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 TGFB3P10600 412 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 MYL4P12829 197 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 CCDC130P13994 396 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 ATP6V1B1P15313 513 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 ZFXP17010 805 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 DESP17661 470 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 EPHA3P29320 983 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 PKNOX1P55347 436 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 OGFRL1Q5TC84 451 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 MAP3K21Q5TCX8 1036 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 FSTL4Q6MZW2 842 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 PAOXQ6QHF9 649 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 DLK2Q6UY11 383 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 STRA8Q7Z7C7 330 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 TDRD5Q8NAT2 981 aaKnown RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 ACVR1CQ8NER5 493 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 OR52K1Q8NGK4 314 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 USP13Q92995 863 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 CERS2Q96G23 380 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 CNBD2Q96M20 576 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 CDRT15Q96T59 188 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 RTKNQ9BST9 563 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 ASB7Q9H672 318 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 APPL1Q9UKG1 709 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 PCDHB12Q9Y5F1 795 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 G3V2L1 256 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 GOLGA8TH3BQL2 631 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 KCNK1O00180 336 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 DNAJA2O60884 412 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 FBXO21O94952 628 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 POLBP06746 335 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 SAT1P21673 171 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 GP5P40197 560 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 PDCD2Q16342 344 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 INSCQ1MX18 579 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 FSCBQ5H9T9 825 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 RBM44Q6ZP01 1051 aaKnown RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 SDCCAG8Q86SQ7 713 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 SNX32Q86XE0 403 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 PQLC1Q8N2U9 271 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 OR6B3Q8NGW1 331 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 MARK4Q96L34 752 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 KCNK16Q96T55 309 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 COPS7BQ9H9Q2 264 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 TCF7L2Q9NQB0 619 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 PRMT7Q9NVM4 692 aaPredicted RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 KIAA1257Q9ULG3 409 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 AKT3Q9Y243 479 aa11.66□□□□□ -0.54
SRP54-213ENST00000556994 ZNF638Q14966 1978 aaKnown RBP11.66□□□□□ -0.54
SRP54-213ENST00000556994 CCDC78A2IDD5 438 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 STX16-NPEPL1H3BU86 382 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 CREB3O43889 395 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 PYGLP06737 847 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 MCF2P10911 925 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 PIM1P11309 404 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 MLNP12872 115 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 XRCC1P18887 633 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 MPSTP25325 297 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 ARL4AP40617 200 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 RANBP1P43487 201 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 THOP1P52888 689 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 PITX1P78337 314 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 XIAPP98170 497 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 ITGA7Q13683 1181 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 CNGA3Q16281 694 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 LRRC23Q53EV4 343 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 TMEM198Q66K66 360 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 IYDQ6PHW0 289 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 LBX2Q6XYB7 198 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 PLPPR4Q7Z2D5 763 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 ZNF567Q8N184 647 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 ZNF669Q96BR6 464 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 KLRG1Q96E93 195 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 FAM96AQ9H5X1 160 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 PSMD13Q9UNM6 376 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 LZTS1Q9Y250 596 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 CDY2AQ9Y6F7 541 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 CDY1Q9Y6F8 540 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 A0A096LPK6 155 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 VILLO15195 856 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 TFAP2AP05549 437 aa11.65□□□□□ -0.54
SRP54-213ENST00000556994 TCN1P20061 433 aaPredicted RBP11.65□□□□□ -0.54
SRP54-213ENST00000556994 PIK3R1P27986 724 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms