RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 E2F1Q01094 437 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 FHL3Q13643 280 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 BRD3Q15059 726 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 MPEG1Q2M385 716 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 RAP1GAP2Q684P5 730 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 CEP85Q6P2H3 762 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 CLEC9AQ6UXN8 241 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 KIAA0408Q6ZU52 694 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 PARS2Q7L3T8 475 aaKnown RBP5.87□□□□□ -1.47
HIF1A-209ENST00000556827 ZNF804AQ7Z570 1209 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 FANCBQ8NB91 859 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 GLIS1Q8NBF1 620 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 CCDC150Q8NCX0 1101 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 ACRBPQ8NEB7 543 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 ZNF566Q969W8 418 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 ZC3H10Q96K80 434 aaKnown RBP5.87□□□□□ -1.47
HIF1A-209ENST00000556827 ZNF778Q96MU6 729 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 LENG8Q96PV6 779 aaPredicted RBP5.87□□□□□ -1.47
HIF1A-209ENST00000556827 MPHOSPH8Q99549 860 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 GDF15Q99988 308 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 MACROD1Q9BQ69 325 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 VN1R3Q9BXE9 311 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 MAGEB5Q9BZ81 275 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 ANKRD2Q9GZV1 360 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 COA1Q9GZY4 146 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 FLRT1Q9NZU1 646 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 DNAJB11Q9UBS4 358 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 SERGEFQ9UGK8 458 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 VPS51Q9UID3 782 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 RIMKLBQ9ULI2 386 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 SH2B3Q9UQQ2 575 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 LTBP1Q14766 1721 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 LAMB4A4D0S4 1761 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 CACNA1SQ13698 1873 aa5.87□□□□□ -1.47
HIF1A-209ENST00000556827 VIRMAQ69YN4 1812 aaKnown RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 THSD7BQ9C0I4 1608 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 FAM234BA2RU67 622 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 WDHD1O75717 1129 aaPredicted RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 COPAP53621 1224 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 TPTEP56180 551 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 EEFSECP57772 596 aaKnown RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 DDX10Q13206 875 aaKnown RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 ARHGEF6Q15052 776 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 DLGAP5Q15398 846 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 SUPT20HL1Q3ZLR7 823 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 PCID2Q5JVF3 399 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 L1TD1Q5T7N2 865 aaKnown RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 TTLL5Q6EMB2 1281 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 FBXO46Q6PJ61 603 aaPredicted RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 NAPRTQ6XQN6 538 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 ZNF782Q6ZMW2 699 aaPredicted RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 APOBEC3FQ8IUX4 373 aaKnown RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 SCARB1Q8WTV0 552 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 SELENOOQ9BVL4 669 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 SLC25A32Q9H2D1 315 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
HIF1A-209ENST00000556827 GABRQQ9UN88 632 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 CEP83Q9Y592 693 aa5.86□□□□□ -1.47
HIF1A-209ENST00000556827 ASTN2O75129 1339 aaPredicted RBP5.85□□□□□ -1.47
HIF1A-209ENST00000556827 SMIM22K7EJ46 135 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 PSMD9O00233 223 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 ZNF213O14771 459 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 PMPCBO75439 489 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 JTBO76095 146 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 FPR3P25089 353 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 CCT4P50991 539 aaKnown RBP5.85□□□□□ -1.47
HIF1A-209ENST00000556827 PSG6Q00889 435 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 TFF2Q03403 129 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 PRKG1Q13976 671 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 ARHGAP15Q53QZ3 475 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 MTX3Q5HYI7 312 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 ANKRD16Q6P6B7 361 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 TOGARAM2Q6ZUX3 1019 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 C1QL2Q7Z5L3 287 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 TBC1D5Q92609 795 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 FAM227BQ96M60 508 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 C1QTNF7Q9BXJ2 289 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.85□□□□□ -1.47
HIF1A-209ENST00000556827 PCDHAC1Q9H158 963 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 MYH16Q9H6N6 1097 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 RGL1Q9NZL6 768 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 TAGLN3Q9UI15 199 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 ADAMTS5Q9UNA0 930 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 SLC27A6Q9Y2P4 619 aa5.85□□□□□ -1.47
HIF1A-209ENST00000556827 MED23Q9ULK4 1368 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 ZNF804BA4D1E1 1349 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 NUP98P52948 1817 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 PI4KAP2A4QPH2 592 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 PODXLO00592 558 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 CES2O00748 559 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 SPRY2O43597 315 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 PEX14O75381 377 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 ARP10275 920 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 PECAM1P16284 738 aaPredicted RBP5.84□□□□□ -1.47
HIF1A-209ENST00000556827 GKP32189 559 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 PPM1AP35813 382 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 HTR3AP46098 478 aa5.84□□□□□ -1.47
HIF1A-209ENST00000556827 RBM5P52756 815 aaKnown RBP eCLIP5.84□□□□□ -1.47
HIF1A-209ENST00000556827 CYP4F2P78329 520 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms