RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 HNF1BP35680 557 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 PRCPP42785 496 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 ACADVLP49748 655 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 NUMBP49757 651 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 PMS1P54277 932 aaKnown RBP16.34■□□□□ 0.21
RCCD1-207ENST00000556774 PNOCQ13519 176 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 EID2Q8N6I1 236 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 ADAM32Q8TC27 787 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 DQX1Q8TE96 717 aaKnown RBP16.34■□□□□ 0.21
RCCD1-207ENST00000556774 SAP25Q8TEE9 199 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 SLC35C1Q96A29 364 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 AZIN2Q96A70 460 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 SKA1Q96BD8 255 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 TSG101Q99816 390 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 DDX50Q9BQ39 737 aaKnown RBP16.34■□□□□ 0.21
RCCD1-207ENST00000556774 MIS12Q9H081 205 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 KIAA1257Q9ULG3 409 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 ZDHHC9Q9Y397 364 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 CEP83Q9Y592 693 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 PCDHB4Q9Y5E5 795 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 KALRNO60229 2985 aa16.34■□□□□ 0.21
RCCD1-207ENST00000556774 EDDM13A0A1B0GTR0 161 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 A0A1W2PQ27 194 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 A0A1W2PQ64 194 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 TRIM49BA6NDI0 452 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 LUC7L3O95232 432 aaKnown RBP16.33■□□□□ 0.2
RCCD1-207ENST00000556774 PRB1P04280 392 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 PAEPP09466 180 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 JUPP14923 745 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 EPHA8P29322 1005 aaPredicted RBP16.33■□□□□ 0.2
RCCD1-207ENST00000556774 CCR5P51681 352 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 ADPRHP54922 357 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 PPP2CBP62714 309 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 PPP2CAP67775 309 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 SEMG2Q02383 582 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 SFSWAPQ12872 951 aaKnown RBP16.33■□□□□ 0.2
RCCD1-207ENST00000556774 ARID5BQ14865 1188 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 DCAF6Q58WW2 860 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 MS4A13Q5J8X5 152 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 C6orf118Q5T5N4 469 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 HES3Q5TGS1 186 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 STK40Q8N2I9 435 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 KDM1BQ8NB78 822 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 KAT5Q92993 513 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 SERAC1Q96JX3 654 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 SERPINB11Q96P15 392 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 ARMCX3Q9UH62 379 aaPredicted RBP16.33■□□□□ 0.2
RCCD1-207ENST00000556774 XPO7Q9UIA9 1087 aaKnown RBP16.33■□□□□ 0.2
RCCD1-207ENST00000556774 ITIH6Q6UXX5 1313 aa16.33■□□□□ 0.2
RCCD1-207ENST00000556774 TARSL2A2RTX5 802 aaKnown RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 C10orf142B7Z368 130 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 RNF225M0QZC1 329 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 YKT6O15498 198 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 TLX3O43711 291 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 FBXO21O94952 628 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 FYNP06241 537 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 SRPRAP08240 638 aaKnown RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 STK19P49842 368 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 FKBP3Q00688 224 aaKnown RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 ECT2LQ008S8 904 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 CNGA2Q16280 664 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 RNF219Q5W0B1 726 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 SND1Q7KZF4 910 aaKnown RBP eCLIP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 TAC4Q86UU9 113 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 CCDC117Q8IWD4 279 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 APCDD1Q8J025 514 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 LGI2Q8N0V4 545 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 OR14C36Q8NHC7 312 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 FAM149B1Q96BN6 582 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 RPL10LQ96L21 214 aaKnown RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 NT5C1BQ96P26 610 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 UBL7Q96S82 380 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-207ENST00000556774 FAM129BQ96TA1 746 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 SLCO3A1Q9UIG8 710 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 NAALADL1Q9UQQ1 740 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 TLR6Q9Y2C9 796 aa16.32■□□□□ 0.2
RCCD1-207ENST00000556774 MOCS3O95396 460 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 ZIC2O95409 532 aaPredicted RBP16.31■□□□□ 0.2
RCCD1-207ENST00000556774 ADH1BP00325 375 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 VAV1P15498 845 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 GOT1P17174 413 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 MZF1P28698 734 aaPredicted RBP16.31■□□□□ 0.2
RCCD1-207ENST00000556774 FMO5P49326 533 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
RCCD1-207ENST00000556774 METAP1P53582 386 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 NXPH1P58417 271 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 TARDBPQ13148 414 aaKnown RBP eCLIP16.31■□□□□ 0.24e-7■□□□□ 10
RCCD1-207ENST00000556774 RAP1GAP2Q684P5 730 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 FBXL19Q6PCT2 694 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 CHSY1Q86X52 802 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 SLC39A13Q96H72 371 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 HSFY1Q96LI6 401 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 GDPD2Q9HCC8 539 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
RCCD1-207ENST00000556774 FLNBO75369 2602 aaKnown RBP16.3■□□□□ 0.2
RCCD1-207ENST00000556774 TLR4O00206 839 aa16.3■□□□□ 0.2
RCCD1-207ENST00000556774 IL1BP01584 269 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms