RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SNX8Q9Y5X2 465 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SYCE1LA8MT33 242 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 A8MX80 341 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 KRT3P12035 628 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 TARSP26639 723 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 MZF1P28698 734 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CBX5P45973 191 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ASMTP46597 345 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ARHGDIBP52566 201 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 NDST1P52848 882 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 THOP1P52888 689 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 VBP1P61758 197 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 YWHAEP62258 255 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 PPP2R2AP63151 447 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 RPP38P78345 283 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 IFI35P80217 286 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 TAP1Q03518 808 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 TAF5Q15542 800 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 INSCQ1MX18 579 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 PKDCCQ504Y2 493 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 TFDP3Q5H9I0 405 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 MDH1BQ5I0G3 518 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 NEPROQ6NW34 567 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 BORAQ6PGQ7 559 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ALKAL1Q6UXT8 129 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF574Q6ZN55 896 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ARHGAP36Q6ZRI8 547 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 RCOR2Q8IZ40 523 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ALDH16A1Q8IZ83 802 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 C12orf29Q8N999 325 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ARL5BQ96KC2 179 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 PARK7Q99497 189 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 LPIN3Q9BQK8 851 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC28BQ9BUN5 200 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 FAM126AQ9BYI3 521 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 EPN3Q9H201 632 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 DMAP1Q9NPF5 467 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 DNAJC17Q9NVM6 304 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 DPP3Q9NY33 737 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SAE1Q9UBE0 346 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 MTRRQ9UBK8 725 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ATP6V1HQ9UI12 483 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ITGA11Q9UKX5 1188 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 AGAP1Q9UPQ3 857 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 LIN7AO14910 233 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 GABBR2O75899 941 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CELF2O95319 508 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 GAS8O95995 478 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 KRT1P04264 644 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ZSCAN5DPP0CG00 497 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF865P0CJ78 1059 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SMIM10L2AP0DMW4 78 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SMIM10L2BP0DMW5 78 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CDK4P11802 303 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ETS1P14921 441 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 ATF6P18850 670 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CDH3P22223 829 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 NOS2P35228 1153 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 MMP13P45452 471 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 PCP4P48539 62 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 OTUD4Q01804 1114 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CALCOCO2Q13137 446 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 AUHQ13825 339 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 PTK2BQ14289 1009 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC142Q17RM4 750 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SETMARQ53H47 684 aaPredicted RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SH3PXD2AQ5TCZ1 1133 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 IQSEC1Q6DN90 963 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 TLDC1Q6P9B6 456 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 RGS9BPQ6ZS82 235 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 RFX8Q6ZV50 586 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SCUBE1Q8IWY4 988 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 MYCBPAPQ8TBZ2 947 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 GRK7Q8WTQ7 553 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 INPP5DQ92835 1189 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 PEX13Q92968 403 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 THAP11Q96EK4 314 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SLC39A13Q96H72 371 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 GBP5Q96PP8 586 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 PEBP4Q96S96 227 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 OSMRQ99650 979 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 GAL3ST1Q99999 423 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 GPATCH1Q9BRR8 931 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC106Q9BWC9 280 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 NXF3Q9H4D5 531 aaKnown RBP5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CYP3A43Q9HB55 503 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CREBZFQ9NS37 354 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 RNF19AQ9NV58 838 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 SNTG2Q9NY99 539 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 WDR35Q9P2L0 1181 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 CPA4Q9UI42 421 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 C15orf41Q9Y2V0 281 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 HEY1Q9Y5J3 304 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 FADS3Q9Y5Q0 445 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 C9IYK1 514 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 M0QYV0 167 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 MED7O43513 233 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 HCRTO43612 131 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 TRAPPC3O43617 180 aa5.22□□□□□ -1.57
TMEM260-210ENST00000556422 NPTXRO95502 500 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms