RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 STRIP1Q5VSL9 837 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 GJB7Q6PEY0 223 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 CCDC137Q6PK04 289 aaKnown RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF365Q70YC5 407 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 SPATC1Q76KD6 591 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 TRMT10CQ7L0Y3 403 aaKnown RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 ENOSF1Q7L5Y1 443 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 OSTM1Q86WC4 334 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 CCDC25Q86WR0 208 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 ZFPM1Q8IX07 1006 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 PPM1KQ8N3J5 372 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 CCDC63Q8NA47 563 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 GSTCDQ8NEC7 633 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 AGBL3Q8NEM8 1001 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF564Q8TBZ8 553 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 PIGOQ8TEQ8 1089 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 CFHR4Q92496 578 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 RAPGEF5Q92565 580 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 SLC5A5Q92911 643 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 LENG9Q96B70 501 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 PGM2Q96G03 612 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 SCLT1Q96NL6 688 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 XPO6Q96QU8 1125 aaKnown RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 RIT2Q99578 217 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 NCAPGQ9BPX3 1015 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 LXNQ9BS40 222 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 TRIM7Q9C029 511 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 ARHGAP39Q9C0H5 1083 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 OR10A5Q9H207 317 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 SLC40A1Q9NP59 571 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 MYOZ2Q9NPC6 264 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 UBE2TQ9NPD8 197 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 A1CFQ9NQ94 594 aaKnown RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 KCNH7Q9NS40 1196 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 KLC4Q9NSK0 619 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 NKIRAS1Q9NYS0 192 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 TMOD4Q9NZQ9 345 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 SLC12A6Q9UHW9 1150 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 AJAP1Q9UKB5 411 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 ZMYND8Q9ULU4 1186 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-241ENST00000556374 NENFQ9UMX5 172 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 IGSF9BQ9UPX0 1349 aa4.63□□□□□ -1.67
ATXN3-241ENST00000556374 BDP1A6H8Y1 2624 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 A0A1W2PRG0 241 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 DDX39AO00148 427 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 MATN2O00339 956 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 O00370 1275 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 IPO5O00410 1097 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 MAPK13O15264 365 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 THAP12O43422 761 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 EDIL3O43854 480 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CAND2O75155 1236 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 MTA2O94776 668 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 FTLP02792 175 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 MYBL1P10243 752 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 DLATP10515 647 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 PYGMP11217 842 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 KRT5P13647 590 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CHN1P15882 459 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 VCAM1P19320 739 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 DRD4P21917 467 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 FGFR4P22455 802 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 TMOD1P28289 359 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ECHS1P30084 290 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 MAPK4P31152 587 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SFNP31947 248 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 STX2P32856 288 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SLC1A1P43005 524 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 MEOX1P50221 254 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 JAK3P52333 1124 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CACNB3P54284 484 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 PRMT2P55345 433 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 BPIFB4P59827 614 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SNAP25P60880 206 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 HHEXQ03014 270 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 KRT17Q04695 432 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 DPTQ07507 201 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 DMP1Q13316 513 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 RASA3Q14644 834 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 PLS1Q14651 629 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SEPT7Q16181 437 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CBWD6Q4V339 395 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CEP55Q53EZ4 464 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ZC2HC1CQ53FD0 456 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 USP39Q53GS9 565 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 LACTB2Q53H82 288 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CBWD3Q5JTY5 395 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CBWD5Q5RIA9 395 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 DUPD1Q68J44 220 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 APOBEC3HQ6NTF7 200 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 TATDN1Q6P1N9 297 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CYB5D1Q6P9G0 228 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 PPP1R21Q6ZMI0 780 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 TRIM72Q6ZMU5 477 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 C1orf186Q6ZWK4 172 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 NIPA1Q7RTP0 329 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF720Q7Z2F6 126 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms