RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 P2RY2P41231 377 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 PRKCIP41743 596 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 UBASH3AP57075 661 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 AUHQ13825 339 aaKnown RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 ACBD5Q5T8D3 534 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 SFMBT2Q5VUG0 894 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 E4F1Q66K89 784 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 PPP1R2P3Q6NXS1 205 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 FBXL22Q6P050 247 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 SERPINA13PQ6UXR4 307 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 PGBD3Q8N328 593 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 EMC1Q8N766 993 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 C3orf20Q8ND61 904 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 IQCDQ96DY2 449 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 RPRD1AQ96P16 312 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 NUP58Q9BVL2 599 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 TKTL2Q9H0I9 626 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 WDCPQ9H6R7 721 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 AIPL1Q9NZN9 384 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 A0A1W2PQJ5 194 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 C2CD4BA6NLJ0 364 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 H0Y626 953 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 I6L893 689 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 SYNCRIPO60506 623 aaKnown RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 ENDOD1O94919 500 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 EPN2O95208 641 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 MOCS3O95396 460 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 ASLP04424 464 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 BCKDHBP21953 392 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 SDC4P31431 198 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 GGCXP38435 758 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 PTPN9P43378 593 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 OXCT1P55809 520 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 BYSLQ13895 437 aaKnown RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 PTPRNQ16849 979 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 MAP7D1Q3KQU3 841 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 C5orf22Q49AR2 442 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 FNDC3BQ53EP0 1204 aaKnown RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 FSCBQ5H9T9 825 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 PITRM1Q5JRX3 1037 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 PMS2CLQ68D20 193 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 DNAJC24Q6P3W2 148 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 LRSAM1Q6UWE0 723 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 CIR1Q86X95 450 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 CCAR2Q8N163 923 aaKnown RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 JOSD2Q8TAC2 188 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 CYB5D2Q8WUJ1 264 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 RXFP2Q8WXD0 754 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 TTC17Q96AE7 1141 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 MRGPRX1Q96LB2 322 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 TMEM245Q9H330 911 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 TSPY26PQ9H489 355 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 IFNKQ9P0W0 207 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 KIAA1522Q9P206 1035 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 INTS6Q9UL03 887 aaKnown RBP11.9□□□□□ -0.5
SLIRP-205ENST00000556310 VANGL2Q9ULK5 521 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 PLA2G4CQ9UP65 541 aa11.9□□□□□ -0.5
SLIRP-205ENST00000556310 TCRBV5S1A1TA0A578 114 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF217O75362 1048 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 CLDN11O75508 207 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 RHOBTB1O94844 696 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 GJB6O95452 261 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 TPM3P06753 285 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 EPHX1P07099 455 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 KRT3P12035 628 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 PDGFRAP16234 1089 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 TNFAIP3P21580 790 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 TGM1P22735 817 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 CSKP41240 450 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 IRAK1P51617 712 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 ATXN1P54253 815 aaKnown RBP11.89□□□□□ -0.51
SLIRP-205ENST00000556310 ATP11AP98196 1134 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 KLHL30Q0D2K2 578 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 CAMK2GQ13555 558 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-205ENST00000556310 NFKBIBQ15653 356 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 PLEKHG6Q3KR16 790 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 CCDC14Q49A88 953 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 ACAD10Q6JQN1 1059 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
SLIRP-205ENST00000556310 STRADAQ7RTN6 431 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 PHLDB2Q86SQ0 1253 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 C14orf80Q86SX3 495 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 KIAA2013Q8IYS2 634 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF683Q8IZ20 524 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 MCOLN2Q8IZK6 566 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 KDM1BQ8NB78 822 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 RLN3Q8WXF3 142 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 IGSF8Q969P0 613 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 HAPLN3Q96S86 360 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 KRTAP3-3Q9BYR6 98 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 KRTAP3-2Q9BYR7 98 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms