RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 ABHD11Q8NFV4 315 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 NCSTNQ92542 709 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 TBC1D5Q92609 795 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 KCNJ9Q92806 393 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 RFKQ969G6 155 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 SAAL1Q96ER3 474 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 EDC3Q96F86 508 aaKnown RBP3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 FBXL20Q96IG2 436 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 TEPSINQ96N21 525 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 SNX18Q96RF0 628 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 MPHOSPH8Q99549 860 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 XYLT2Q9H1B5 865 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 DEF6Q9H4E7 631 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 TTC12Q9H892 705 aaPredicted RBP3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 USP29Q9HBJ7 922 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 CD248Q9HCU0 757 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 ARHGEF3Q9NR81 526 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 ABHD10Q9NUJ1 306 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 SEPT11Q9NVA2 429 aaKnown RBP3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 PARPBPQ9NWS1 579 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 KCTD5Q9NXV2 234 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 MPP6Q9NZW5 540 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 KLQ9UEF7 1012 aa3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 ADD3Q9UEY8 706 aaKnown RBP3.26□□□□□ -1.89
MTHFD1-212ENST00000555858 hCG_1807616A0A1W2PRN6 198 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 BICDL2A1A5D9 508 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SYNDIG1LA6NDD5 238 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 TTC34A8MYJ7 566 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SYN3O14994 580 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 PER2O15055 1255 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 MPPED1O15442 326 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 P4HA2O15460 535 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 PAX4O43316 350 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 PEX1O43933 1283 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SEC14L2O76054 403 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 KAT7O95251 611 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ITGB3P05106 788 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 URODP06132 367 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SPARCP09486 303 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 NPSP0C0P6 89 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 NR2F6P10588 404 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 EGR2P11161 476 aaPredicted RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ITGAMP11215 1152 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 COX7A2P14406 83 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ITPKBP27987 946 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 PCSK6P29122 969 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 TM4SF1P30408 202 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 FOLR3P41439 243 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SSR1P43307 286 aaKnown RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 AGTR2P50052 363 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 EIF3BP55884 814 aaKnown RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 UFM1P61960 85 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SLC25A3Q00325 362 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 PSG6Q00889 435 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 B4GALNT1Q00973 533 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 CREB5Q02930 508 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 CFHR3Q02985 330 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 LMAN2Q12907 356 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 CHAF1BQ13112 559 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 MTA1Q13330 715 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 FZD5Q13467 585 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 BYSLQ13895 437 aaKnown RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ERCC6LQ2NKX8 1250 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 GXYLT1Q4G148 440 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 TIGD2Q4W5G0 525 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SH2D4BQ5SQS7 431 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ZKSCAN2Q63HK3 967 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 KIRREL2Q6UWL6 708 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 IKBIPQ70UQ0 350 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 RRM2BQ7LG56 351 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 GALNT7Q86SF2 657 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ANKRD23Q86SG2 305 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ARHGEF19Q8IW93 802 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 CNTROBQ8N137 903 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 TTC39CQ8N584 583 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SLC25A43Q8WUT9 341 aaPredicted RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 RAB40AQ8WXH6 277 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 CNOT9Q92600 299 aaKnown RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 AKAP1Q92667 903 aaKnown RBP eCLIP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 FAM120BQ96EK7 910 aaKnown RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 LOXL4Q96JB6 756 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ASB2Q96Q27 587 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 CLSTN3Q9BQT9 956 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 NPLQ9BXD5 320 aaPredicted RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 AP1M1Q9BXS5 423 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 HDHD5Q9BXW7 423 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 TRIM31Q9BZY9 425 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 EPHX3Q9H6B9 360 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 ZNF703Q9H7S9 590 aaPredicted RBP3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SFXN1Q9H9B4 322 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 DUSP22Q9NRW4 184 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 HCFC1R1Q9NWW0 138 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SLC25A13Q9UJS0 675 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 FZD4Q9ULV1 537 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 FZD1Q9UP38 647 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 B3GNT3Q9Y2A9 372 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 TMEM5Q9Y2B1 443 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 SNX8Q9Y5X2 465 aa3.25□□□□□ -1.89
MTHFD1-212ENST00000555858 RPGRIP1LQ68CZ1 1315 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms