RNA–Protein interactions for RNA: ENST00000555822.5

CCDC85C-204, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5 BASIC

Gene CCDC85C, Length 930 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-204ENST00000555822 HOXB2P14652 356 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 CSRP1P21291 193 aaKnown RBP16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 SLC11A2P49281 568 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 MTA1Q13330 715 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 E2F5Q15329 346 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 OTUD1Q5VV17 481 aaPredicted RBP16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 DAB2IPQ5VWQ8 1189 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 PMS2CLQ68D20 193 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 WDR59Q6PJI9 974 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 TMC6Q7Z403 805 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 BNIPLQ7Z465 357 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 MDGA1Q8NFP4 955 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 UCMAQ8WVF2 138 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 ZCCHC14Q8WYQ9 949 aaKnown RBP16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 TPSD1Q9BZJ3 242 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 ISCUQ9H1K1 167 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 BCCIPQ9P287 314 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 KLK13Q9UKR3 277 aa16.65■□□□□ 0.26
CCDC85C-204ENST00000555822 FLNBO75369 2602 aaKnown RBP16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 TCRBV21S2A2A0A5A6 115 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 TMEM8BA6NDV4 472 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 M0QYT0 321 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 ACSL4O60488 711 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 TSPAN3O60637 253 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 F9P00740 461 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 PLEKP08567 350 aaPredicted RBP16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 KRT3P12035 628 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 CCR1P32246 355 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 WASP42768 502 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 SULT1E1P49888 294 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 ELF2Q15723 593 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 TRNP1Q6NT89 227 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 ANKS1BQ7Z6G8 1248 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 CHPFQ8IZ52 775 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 TMA16Q96EY4 203 aaKnown RBP16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 BTN2A3PQ96KV6 586 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 SELENOOQ9BVL4 669 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 ZNHIT6Q9NWK9 470 aaKnown RBP16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 ADAMTS1Q9UHI8 967 aa16.64■□□□□ 0.25
CCDC85C-204ENST00000555822 ADAMTS20P59510 1910 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 SSU72P8A0A1W2PR75 194 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 C2CD4BA6NLJ0 364 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 TMCO5BA8MYB1 307 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 KCNU1A8MYU2 1149 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 AKR1B15C9JRZ8 316 aaPredicted RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 NPC1O15118 1278 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 ZBTB24O43167 697 aaPredicted RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 ENDOD1O94919 500 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 FTLP02792 175 aaPredicted RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 TFE3P19532 575 aaPredicted RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 RRM1P23921 792 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 HOXD9P28356 352 aaPredicted RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 PTPN9P43378 593 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 CXCR3P49682 368 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 ADKP55263 362 aaKnown RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 BYSLQ13895 437 aaKnown RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 EIF4HQ15056 248 aaKnown RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 GEN1Q17RS7 908 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 UAP1L1Q3KQV9 507 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 FAM133BQ5BKY9 247 aaKnown RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 ZC3H12AQ5D1E8 599 aaKnown RBP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 BRMS1LQ5PSV4 323 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 PPP1R15BQ5SWA1 713 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 DNAJC24Q6P3W2 148 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 PGBD3Q8N328 593 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 ATP6V0D2Q8N8Y2 350 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 JOSD2Q8TAC2 188 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 HMGB4Q8WW32 186 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 ACOX2Q99424 681 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 TBCBQ99426 244 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 GABRG3Q99928 467 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 TMEM9BQ9NQ34 198 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 CALCOCO1Q9P1Z2 691 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 SLC12A6Q9UHW9 1150 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 CLEC4EQ9ULY5 219 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 PAXBP1Q9Y5B6 917 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 APC2O95996 2303 aa16.63■□□□□ 0.25
CCDC85C-204ENST00000555822 TNRC6BQ9UPQ9 1833 aaKnown RBP16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 SYNJ2BP-COX16A0A087WUM0 186 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 A0A087X0T9 212 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 SPAARA0A1B0GVQ0 90 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 FAM228BP0C875 321 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 MYBL1P10243 752 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 PDGFRAP16234 1089 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 SDC4P31431 198 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 RFC1P35251 1148 aaPredicted RBP16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 DEUP1Q05D60 604 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 NME3Q13232 169 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 MPP7Q5T2T1 576 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 NADSYN1Q6IA69 706 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 PLEKHA7Q6IQ23 1121 aa16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 SND1Q7KZF4 910 aaKnown RBP eCLIP16.62■□□□□ 0.25
CCDC85C-204ENST00000555822 EMC1Q8N766 993 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms