RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 OSBPL8Q9BZF1 889 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 ARHGEF4Q9NR80 690 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 SLC2A4RGQ9NR83 387 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 MPP6Q9NZW5 540 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 NEU3Q9UQ49 428 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 SAR1BQ9Y6B6 198 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 hCG_1818297A0A087WSY0 165 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 H0Y626 953 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 DCLK1O15075 740 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 CACNG3O60359 315 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 TJP3O95049 919 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 LUC7L3O95232 432 aaKnown RBP12.82□□□□□ -0.36
SHMT2-221ENST00000555773 ASGR2P07307 311 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 SRFP11831 508 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 HOXD9P28356 352 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-221ENST00000555773 OR1E1P30953 314 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 SGSHP51688 502 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 YBEYP58557 167 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-221ENST00000555773 TNK2Q07912 1038 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 MMRN1Q13201 1228 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 SLC12A1Q13621 1099 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 ALFQ53S48 1182 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 SEL1L2Q5TEA6 688 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 SLC9A4Q6AI14 798 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 TMCO3Q6UWJ1 677 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 ZNF783Q6ZMS7 281 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 BBS12Q6ZW61 710 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
SHMT2-221ENST00000555773 RFX6Q8HWS3 928 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 UMODL1-AS1Q8N2C9 162 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 PQLC3Q8N755 202 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 EXOC4Q96A65 974 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 OSBPL9Q96SU4 736 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 C8orf33Q9H7E9 229 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-221ENST00000555773 PLK2Q9NYY3 685 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 GTSE1Q9NYZ3 720 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 KIAA1522Q9P206 1035 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-221ENST00000555773 RNF14Q9UBS8 474 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 ZNF212Q9UDV6 495 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 TTC7AQ9ULT0 858 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-221ENST00000555773 SORCS3Q9UPU3 1222 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 DENND4AQ7Z401 1863 aa12.82□□□□□ -0.36
SHMT2-221ENST00000555773 ILVBLA1L0T0 632 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 OTOL1A6NHN0 477 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-221ENST00000555773 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-221ENST00000555773 APOL1O14791 398 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 CEP104O60308 925 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 CST8O60676 142 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 GJA4P35212 333 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 SERPINB6P35237 376 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 ETFBP38117 255 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 EIF2DP41214 584 aaKnown RBP12.81□□□□□ -0.36
SHMT2-221ENST00000555773 NR2C2P49116 596 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 NDST2P52849 883 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 ZNF211Q13398 564 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-221ENST00000555773 CDH18Q13634 790 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 TUBB2AQ13885 445 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 PAFAH1B3Q15102 231 aaKnown RBP12.81□□□□□ -0.36
SHMT2-221ENST00000555773 TJAP1Q5JTD0 557 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 DCAF12L1Q5VU92 463 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 KAZNQ674X7 775 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 C1orf228Q6PIY5 440 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 ANKS1BQ7Z6G8 1248 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 LRRC49Q8IUZ0 686 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 MFN1Q8IWA4 741 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 ETFBKMTQ8IXQ9 262 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 GJD3Q8N144 294 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 RASGEF1CQ8N431 466 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 CARNMT1Q8N4J0 409 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 PLD5Q8N7P1 536 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 MAIP1Q8WWC4 291 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 MSANTD3Q96H12 275 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 PSMB7Q99436 277 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 NAP1L3Q99457 506 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-221ENST00000555773 TUBB2BQ9BVA1 445 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 MAGEH1Q9H213 219 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 DUSP12Q9UNI6 340 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 SLC27A6Q9Y2P4 619 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 RAD54BQ9Y620 910 aa12.81□□□□□ -0.36
SHMT2-221ENST00000555773 NCAM2O15394 837 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 CISD3P0C7P0 127 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 KRT10P13645 584 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 TGM2P21980 687 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 CXCR5P32302 372 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 IRAK1P51617 712 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 PLK1P53350 603 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 DMC1Q14565 340 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 GAB4Q2WGN9 574 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 PARP15Q460N3 678 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 AFMIDQ63HM1 303 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 NUDT18Q6ZVK8 323 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 TFAP2DQ7Z6R9 452 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 RALGPS2Q86X27 583 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-221ENST00000555773 CIR1Q86X95 450 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-221ENST00000555773 SLC13A5Q86YT5 568 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-221ENST00000555773 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 SUGP1Q8IWZ8 645 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms