RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 APCDD1Q8J025 514 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 ZCCHC9Q8N567 271 aaKnown RBP25.24■■□□□ 1.63
PRKCH-216ENST00000555542 MINDY1Q8N5J2 469 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 PRMT1Q99873 361 aaKnown RBP25.24■■□□□ 1.63
PRKCH-216ENST00000555542 FAM207AQ9NSI2 230 aaPredicted RBP25.24■■□□□ 1.63
PRKCH-216ENST00000555542 VANGL2Q9ULK5 521 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 NCOR2Q9Y618 2525 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 LAMA1P25391 3075 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 A0A1B0GTW7 788 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 METTL12A8MUP2 240 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 SIN3BO75182 1162 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 GFPT2O94808 682 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 LSM8O95777 96 aaKnown RBP25.23■■□□□ 1.63
PRKCH-216ENST00000555542 MMEP08473 750 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 NNMTP40261 264 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 KLK7P49862 253 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 POLR2FP61218 127 aaKnown RBP25.23■■□□□ 1.63
PRKCH-216ENST00000555542 CENPCQ03188 943 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 SLC12A1Q13621 1099 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 HNRNPA1L2Q32P51 320 aaKnown RBP25.23■■□□□ 1.63
PRKCH-216ENST00000555542 FBXL22Q6P050 247 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 LRSAM1Q6UWE0 723 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 DEFB124Q8NES8 71 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 MRGPRX3Q96LB0 322 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 BTBD1Q9H0C5 482 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 SIK2Q9H0K1 926 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 SLC32A1Q9H598 525 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 NCKAP1Q9Y2A7 1128 aa25.23■■□□□ 1.63
PRKCH-216ENST00000555542 GOLGA8SH3BPF8 625 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 GIPC1O14908 333 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 MBD3O95983 291 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 CSRP1P21291 193 aaKnown RBP25.22■■□□□ 1.63
PRKCH-216ENST00000555542 ACSL1P33121 698 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 GGCXP38435 758 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 OXCT1P55809 520 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 MYL5Q02045 173 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 ZNF252P-AS1Q0IIN9 211 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 AUHQ13825 339 aaKnown RBP25.22■■□□□ 1.63
PRKCH-216ENST00000555542 KDM1BQ8NB78 822 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 EPS8L1Q8TE68 723 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 DNASE2BQ8WZ79 361 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 MYO19Q96H55 970 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 RPL10LQ96L21 214 aaKnown RBP25.22■■□□□ 1.63
PRKCH-216ENST00000555542 SPAG5Q96R06 1193 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 PPP1R9BQ96SB3 815 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 GANQ9H2C0 597 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 WDCPQ9H6R7 721 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 NLRC4Q9NPP4 1024 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 EIF2B4Q9UI10 523 aaKnown RBP25.22■■□□□ 1.63
PRKCH-216ENST00000555542 PAXBP1Q9Y5B6 917 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 HS3ST4Q9Y661 456 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 PCDH15Q96QU1 1955 aa25.22■■□□□ 1.63
PRKCH-216ENST00000555542 EDDM13A0A1B0GTR0 161 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 TTC34A8MYJ7 566 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 PAGE1O75459 146 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 SEMA4FO95754 770 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 CEACAM1P13688 526 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 CDK11BP21127 795 aaKnown RBP25.21■■□□□ 1.63
PRKCH-216ENST00000555542 GABRB2P47870 512 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 DEUP1Q05D60 604 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 C2CD6Q53TS8 623 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 NAA35Q5VZE5 725 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 XYLT1Q86Y38 959 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 OR2I1PQ8NGU4 316 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 CPA5Q8WXQ8 436 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 CNTNAP3BQ96NU0 1288 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 NPY6RQ99463 290 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 CNTNAP3Q9BZ76 1288 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 TKTL2Q9H0I9 626 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 PCED1AQ9H1Q7 454 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 RSPH9Q9H1X1 276 aaPredicted RBP25.21■■□□□ 1.63
PRKCH-216ENST00000555542 PIGVQ9NUD9 493 aa25.21■■□□□ 1.63
PRKCH-216ENST00000555542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.2■■□□□ 1.62
PRKCH-216ENST00000555542 BCAT2O15382 392 aaPredicted RBP25.2■■□□□ 1.62
PRKCH-216ENST00000555542 F9P00740 461 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 SCNN1AP37088 669 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 COPB1P53618 953 aaKnown RBP25.2■■□□□ 1.62
PRKCH-216ENST00000555542 SULT2A1Q06520 285 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 SFSWAPQ12872 951 aaKnown RBP25.2■■□□□ 1.62
PRKCH-216ENST00000555542 ZNF177Q13360 481 aaPredicted RBP25.2■■□□□ 1.62
PRKCH-216ENST00000555542 BRMS1LQ5PSV4 323 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 CCDC183Q5T5S1 534 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 ZNF677Q86XU0 584 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 IGSF8Q969P0 613 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 C6orf106Q9H6K1 298 aaPredicted RBP25.2■■□□□ 1.62
PRKCH-216ENST00000555542 SLCO3A1Q9UIG8 710 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 ANGPTL2Q9UKU9 493 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 SCML1Q9UN30 329 aa25.2■■□□□ 1.62
PRKCH-216ENST00000555542 CNOT1A5YKK6 2376 aaKnown RBP25.19■■□□□ 1.62
PRKCH-216ENST00000555542 TARSL2A2RTX5 802 aaKnown RBP25.19■■□□□ 1.62
PRKCH-216ENST00000555542 TFE3P19532 575 aaPredicted RBP25.19■■□□□ 1.62
PRKCH-216ENST00000555542 MZF1P28698 734 aaPredicted RBP25.19■■□□□ 1.62
PRKCH-216ENST00000555542 SOX5P35711 763 aa25.19■■□□□ 1.62
PRKCH-216ENST00000555542 STK19P49842 368 aaPredicted RBP25.19■■□□□ 1.62
PRKCH-216ENST00000555542 GRIK2Q13002 908 aa25.19■■□□□ 1.62
PRKCH-216ENST00000555542 MMAAQ8IVH4 418 aaKnown RBP25.19■■□□□ 1.62
PRKCH-216ENST00000555542 SLC20A1Q8WUM9 679 aa25.19■■□□□ 1.62
PRKCH-216ENST00000555542 TBCBQ99426 244 aa25.19■■□□□ 1.62
PRKCH-216ENST00000555542 ZDHHC5Q9C0B5 715 aa25.19■■□□□ 1.62
PRKCH-216ENST00000555542 PABPC3Q9H361 631 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms