RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 GABRB2P47870 512 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 CDKL1Q00532 357 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 IFRD2Q12894 506 aaPredicted RBP17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 TAZQ16635 292 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 FAM160B1Q5W0V3 765 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 ILDR2Q71H61 639 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 FAM110BQ8TC76 370 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■■□□ 16
PPP4R3A-208ENST00000555462 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 CELF6Q96J87 481 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 NR1H4Q96RI1 486 aaPredicted RBP17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 SLC39A3Q9BRY0 314 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 TMEM134Q9H6X4 195 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 HESX1Q9UBX0 185 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 TUBGCP4Q9UGJ1 667 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 TLL2Q9Y6L7 1015 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 ZBTB42B2RXF5 422 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 H3BSA7 217 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 ACKR2O00590 384 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 KLF11O14901 512 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 P4HA1P13674 534 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 HNRNPLP14866 589 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■■□□ 15.1
PPP4R3A-208ENST00000555462 PTPN1P18031 435 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 GALK1P51570 392 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 CDH15P55291 814 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 FBXW8Q8N3Y1 598 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 METTL25Q8N6Q8 603 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 CDKL2Q92772 493 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 EFR3BQ9Y2G0 817 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 LRRC37AA6NMS7 1700 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
PPP4R3A-208ENST00000555462 ATP6AP2A0A1C7CYW4 349 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 ATP6AP2O75787 350 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 AOC1P19801 751 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 CHN2P52757 468 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 BOLA3Q53S33 107 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 TMCO4Q5TGY1 634 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 IER5Q5VY09 327 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 SLC9A4Q6AI14 798 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 FSTL4Q6MZW2 842 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 ACAD11Q709F0 780 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 CPNE9Q8IYJ1 553 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 FNIP1Q8TF40 1166 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 PTPRHQ9HD43 1115 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 DMAP1Q9NPF5 467 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 TCF7L2Q9NQB0 619 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 GALNT8Q9NY28 637 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 AP4B1Q9Y6B7 739 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 H3BNX3 289 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 SPAG6O75602 509 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 OLFML1Q6UWY5 402 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 RAB3IL1Q8TBN0 382 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 MRPL1Q9BYD6 325 aaKnown RBP17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 SNTG2Q9NY99 539 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 ARHGAP26Q9UNA1 814 aa17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 TDRKHQ9Y2W6 561 aaKnown RBP17.46■□□□□ 0.39
PPP4R3A-208ENST00000555462 FKBP6O75344 327 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 KLHL2O95198 593 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 VDRP11473 427 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 FDFT1P37268 417 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 LILRA2Q8N149 483 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 ARNTL2Q8WYA1 636 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 CMTM5Q96DZ9 223 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 PKP2Q99959 881 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 NIFKQ9BYG3 293 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 VCX3BQ9H321 246 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 VCX3AQ9NNX9 186 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 BARX2Q9UMQ3 279 aaPredicted RBP17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 SCN1AP35498 2009 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 FAM72CH0Y354 149 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 PIGNO95427 931 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 INSRRP14616 1297 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 FAM72AQ5TYM5 149 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 FAM72DQ6L9T8 149 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 FAM72BQ86X60 149 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 APBA2Q99767 749 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 GATA5Q9BWX5 397 aaPredicted RBP17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 TRDMT1O14717 391 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 GLRA3O75311 464 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 CRTAMO95727 393 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 DPP6P42658 865 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 SLC6A3Q01959 620 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 POU5F1BQ06416 359 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 CTBP1Q13363 440 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 LSM12Q3MHD2 195 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 NCBP2-AS2Q69YL0 99 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 CDKL3Q8IVW4 592 aaPredicted RBP17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 DSELQ8IZU8 1212 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 KCTD4Q8WVF5 259 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 ATP6V1E2Q96A05 226 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 CAAP1Q9H8G2 361 aa17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 GNEQ9Y223 722 aaKnown RBP17.45■□□□□ 0.38
PPP4R3A-208ENST00000555462 MBTD1Q05BQ5 628 aa17.44■□□□□ 0.38
PPP4R3A-208ENST00000555462 SURF1Q15526 300 aa17.44■□□□□ 0.38
PPP4R3A-208ENST00000555462 GSTA3Q16772 222 aa17.44■□□□□ 0.38
PPP4R3A-208ENST00000555462 CATSPERGQ6ZRH7 1159 aa17.44■□□□□ 0.38
PPP4R3A-208ENST00000555462 DEFB106AQ8N104 65 aa17.44■□□□□ 0.38
PPP4R3A-208ENST00000555462 ZMAT2Q96NC0 199 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms