RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 FBXL19Q6PCT2 694 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 SND1Q7KZF4 910 aaKnown RBP eCLIP13.59□□□□□ -0.23
XRCC3-212ENST00000555231 SCML4Q8N228 414 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 STK40Q8N2I9 435 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 UBR7Q8N806 425 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 ZNF557Q8N988 423 aaPredicted RBP13.59□□□□□ -0.23
XRCC3-212ENST00000555231 OR14C36Q8NHC7 312 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 SERAC1Q96JX3 654 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 RPL10LQ96L21 214 aaKnown RBP13.59□□□□□ -0.23
XRCC3-212ENST00000555231 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
XRCC3-212ENST00000555231 SPATA32Q96LK8 384 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 FAM129BQ96TA1 746 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 MIS12Q9H081 205 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 SLCO3A1Q9UIG8 710 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 FZD4Q9ULV1 537 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 CEP83Q9Y592 693 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 TYW5A2RUC4 315 aaKnown RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 TLR4O00206 839 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 ATXN7O15265 892 aaPredicted RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 C1SP09871 688 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 STK19P49842 368 aaPredicted RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 CCR5P51681 352 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 ADPRHP54922 357 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 NXPH1P58417 271 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 YWHAEP62258 255 aaKnown RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 DCAF6Q58WW2 860 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 MS4A13Q5J8X5 152 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 TMEM270Q6UE05 265 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 LCLAT1Q6UWP7 414 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 DQX1Q8TE96 717 aaKnown RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 SLC35F5Q8WV83 523 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 IRGQQ8WZA9 623 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 TSC1Q92574 1164 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 SNX21Q969T3 373 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 AZIN2Q96A70 460 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 FCRL3Q96P31 734 aaPredicted RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 ZSWIM1Q9BR11 485 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 IRX2Q9BZI1 471 aaPredicted RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 XPO7Q9UIA9 1087 aaKnown RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 COQ4Q9Y3A0 265 aa13.58□□□□□ -0.24
XRCC3-212ENST00000555231 TDRD6O60522 2096 aaKnown RBP13.58□□□□□ -0.24
XRCC3-212ENST00000555231 SETXQ7Z333 2677 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 HELZ2Q9BYK8 2649 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3DA0A087WVF3 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3IA0A087WXS9 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3EA0A087X179 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3KA0A087X1G2 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 EDDM13A0A1B0GTR0 161 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3FA6NER0 549 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 C10orf142B7Z368 130 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3LB9A6J9 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 M0QYV0 167 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 RNF225M0QZC1 329 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 YKT6O15498 198 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 RRP8O43159 456 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 SDC3O75056 442 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 LUC7L3O95232 432 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 IL1BP01584 269 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 FYNP06241 537 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 SRPRAP08240 638 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3HP0C7X1 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 CDK4P11802 303 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 VAV1P15498 845 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 GOT1P17174 413 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 BRD2P25440 801 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 MAT2AP31153 395 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 METAP1P53582 386 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 RTP5Q14D33 572 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 SLC45A4Q5BKX6 768 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 RNF219Q5W0B1 726 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3GQ6DHY5 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3CQ6IPX1 549 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 SPATS2Q86XZ4 545 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 CCDC117Q8IWD4 279 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 TBC1D3Q8IZP1 549 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 PTPRN2Q92932 1015 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 DDX50Q9BQ39 737 aaKnown RBP13.57□□□□□ -0.24
XRCC3-212ENST00000555231 NRSN2Q9GZP1 204 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 GOLPH3LQ9H4A5 285 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 NAALADL1Q9UQQ1 740 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 PCDHB4Q9Y5E5 795 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 ITIH6Q6UXX5 1313 aa13.57□□□□□ -0.24
XRCC3-212ENST00000555231 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 BRINP1O60477 761 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 MOCS3O95396 460 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 C5AR1P21730 350 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 ECT2LQ008S8 904 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 ARID5BQ14865 1188 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 SFMBT2Q5VUG0 894 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 RAP1GAP2Q684P5 730 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 NAPEPLDQ6IQ20 393 aa13.56□□□□□ -0.24
XRCC3-212ENST00000555231 KANSL1Q7Z3B3 1105 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms