RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 MOCS2O96007 188 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 SRPRAP08240 638 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 ATXN1LP0C7T5 689 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 CST6Q15828 149 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 KIAA0895LQ68EN5 471 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 TMEM110Q86TL2 294 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 DHX40Q8IX18 779 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 CFAP52Q8N1V2 620 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 RHBDD1Q8TEB9 315 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 TRIM62Q9BVG3 475 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 FBXL12Q9NXK8 326 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 ADAMTS1Q9UHI8 967 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 ERVW-1Q9UQF0 538 aa16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.23■□□□□ 0.19
ARHGEF40-205ENST00000555052 TARSL2A2RTX5 802 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 TTC34A8MYJ7 566 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 E5RJQ4 531 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 H0Y8X5 98 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 MID1O15344 667 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 APOEP02649 317 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 KRT5P13647 590 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 CCT8P50990 548 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 GALCP54803 685 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 STX17P56962 302 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 RACK1P63244 317 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 PITX1P78337 314 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 PAK1Q13153 545 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 SUZ12Q15022 739 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 RAP1GAP2Q684P5 730 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 TMPRSS7Q7RTY8 843 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 LGI2Q8N0V4 545 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 ZNF606Q8WXB4 792 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 POPDC2Q9HBU9 364 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 ACP6Q9NPH0 428 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 NCKAP1Q9Y2A7 1128 aa16.22■□□□□ 0.19
ARHGEF40-205ENST00000555052 EDDM13A0A1B0GTR0 161 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 A0A1W2PP55 124 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 A0A1W2PPC4 97 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 BIN1O00499 593 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 KCNK3O14649 394 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 VILLO15195 856 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 RNASEH1O60930 286 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 LETM1O95202 739 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 TRUB2O95900 331 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 TACR2P21452 398 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 GRK6P43250 576 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 YWHAZP63104 245 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 ECT2LQ008S8 904 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 PDCLQ13371 301 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 BECN1Q14457 450 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 KCNJ12Q14500 433 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 NCEH1Q6PIU2 408 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 CHSY1Q86X52 802 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 MMAAQ8IVH4 418 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 CCDC117Q8IWD4 279 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 APCDD1Q8J025 514 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 GANCQ8TET4 914 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 BTN2A3PQ96KV6 586 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 SLC6A18Q96N87 628 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 FAM129BQ96TA1 746 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 PRMT1Q99873 361 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 SRRTQ9BXP5 876 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 NEUROG2Q9H2A3 272 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 EBF2Q9HAK2 575 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 UBE2TQ9NPD8 197 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 TJP2Q9UDY2 1190 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 SLCO3A1Q9UIG8 710 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 FZD4Q9ULV1 537 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 LHX6Q9UPM6 363 aa16.21■□□□□ 0.19
ARHGEF40-205ENST00000555052 MGAQ8IWI9 3026 aa16.21■□□□□ 0.18
ARHGEF40-205ENST00000555052 PTPRQQ9UMZ3 2332 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 ADAMTS20P59510 1910 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 BECN2A8MW95 431 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 CAPN9O14815 690 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 MED7O43513 233 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 MOCS3O95396 460 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 HOXB3P14651 431 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 GNA15P30679 374 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 SFSWAPQ12872 951 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 TAF5Q15542 800 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 ENOSF1Q7L5Y1 443 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 ADAT2Q7Z6V5 191 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 AADATQ8N5Z0 425 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 OR2T34Q8NGX1 318 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 PTPRN2Q92932 1015 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 MED15Q96RN5 788 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 THAP9Q9H5L6 903 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 CCDC86Q9H6F5 360 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 GPSM3Q9Y4H4 160 aa16.2■□□□□ 0.18
ARHGEF40-205ENST00000555052 A0A1B0GTQ1 180 aa16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 LRRC72A6NJI9 287 aa16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 KCNU1A8MYU2 1149 aa16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 THAP12O43422 761 aa16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 TNFSF14O43557 240 aa16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 DFNA5O60443 496 aa16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 GADD45BO75293 160 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF40-205ENST00000555052 RNASEH2AO75792 299 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms