RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PRPSAP2O60256 369 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 LUC7L3O95232 432 aaKnown RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 TMEM253P0C7T8 217 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 POLR2EP19388 210 aaKnown RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 HOXD9P28356 352 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 HOXA6P31267 233 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 SLC6A4P31645 630 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 HTR7P34969 479 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 NNMTP40261 264 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 ARHGAP25P42331 645 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 CDH4P55283 916 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 NRG1Q02297 640 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 SULT2A1Q06520 285 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 SCAPQ12770 1279 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 MTAPQ13126 283 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 C15orf59Q2T9L4 293 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 C5orf22Q49AR2 442 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 EFHC2Q5JST6 749 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 C6orf118Q5T5N4 469 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 SYT13Q7L8C5 426 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 SETD3Q86TU7 594 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 RHOT2Q8IXI1 618 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 CARNMT1Q8N4J0 409 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 CAMKK1Q8N5S9 505 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 PRMT1Q99873 361 aaKnown RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 BAG1Q99933 345 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 NUP85Q9BW27 656 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 FBRSL1Q9HCM7 1045 aaKnown RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 ELOVL2Q9NXB9 296 aa10.93□□□□□ -0.66
TMEM260-206ENST00000555046 PPARGC1AQ9UBK2 798 aaKnown RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-206ENST00000555046 COL4A3Q01955 1670 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 DMXL2Q8TDJ6 3036 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 SRGAP2O75044 1071 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 RNF40O75150 1001 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ALDH1A2O94788 518 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 PAPSS2O95340 614 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ASLP04424 464 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 PABPC1P11940 636 aaKnown RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 HNRNPLP14866 589 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 TFE3P19532 575 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 SDHBP21912 280 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 L1CAMP32004 1257 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ETFBP38117 255 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 DGKEP52429 567 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 HDAC4P56524 1084 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 RPS24P62847 133 aaKnown RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 KRT83P78385 493 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 KDSRQ06136 332 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 HADHQ16836 314 aaKnown RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ZNF528Q3MIS6 628 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 C2orf27AQ580R0 203 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ERMARDQ5T6L9 678 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 RNF43Q68DV7 783 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 TRNP1Q6NT89 227 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ZNF783Q6ZMS7 281 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 C12orf40Q86WS4 652 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 PHTF2Q8N3S3 785 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ZNF513Q8N8E2 541 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 OLIG1Q8TAK6 271 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 USP33Q8TEY7 942 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 EPAS1Q99814 870 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 POLMQ9NP87 494 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 RBM12Q9NTZ6 932 aaKnown RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ABCB8Q9NUT2 735 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 XPO7Q9UIA9 1087 aaKnown RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 GGA2Q9UJY4 613 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 CDV3Q9UKY7 258 aaKnown RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 VANGL2Q9ULK5 521 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 EPN1Q9Y6I3 576 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 ZNF638Q14966 1978 aaKnown RBP10.92□□□□□ -0.66
TMEM260-206ENST00000555046 CACNA1IQ9P0X4 2223 aa10.92□□□□□ -0.66
TMEM260-206ENST00000555046 IGLV3-10A0A075B6K4 115 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 CCDC163A0A0D9SF12 145 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 E9PAM4 449 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 CCP110O43303 1012 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 SYNCRIPO60506 623 aaKnown RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 LCA5LO95447 670 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 GJB6O95452 261 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 NTSR1P30989 418 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 TIE1P35590 1138 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 MAGEA1P43355 309 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 KIR2DL1P43626 348 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 PLK1P53350 603 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 SEC13P55735 322 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 ST8SIA6P61647 398 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 CSTF1Q05048 431 aaKnown RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 SH3PXD2AQ5TCZ1 1133 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 OTUD1Q5VV17 481 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 RWDD4Q6NW29 188 aaKnown RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 ZC3H14Q6PJT7 736 aaKnown RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 KIAA0907Q7Z7F0 614 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 CHPFQ8IZ52 775 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 CCAR2Q8N163 923 aaKnown RBP10.91□□□□□ -0.66
TMEM260-206ENST00000555046 CFAP52Q8N1V2 620 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 NIPA2Q8N8Q9 360 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 SPC24Q8NBT2 197 aa10.91□□□□□ -0.66
TMEM260-206ENST00000555046 RPLP0P6Q8NHW5 317 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms