RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 OLA1Q9NTK5 396 aaKnown RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 AFF4Q9UHB7 1163 aaKnown RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 SLC24A2Q9UI40 661 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 NUDT5Q9UKK9 219 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 RGS16O15492 202 aaPredicted RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 RPL17P18621 184 aaKnown RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 MPP2Q14168 576 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 PARP6Q2NL67 630 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 LRRC8BQ6P9F7 803 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 VPS52Q8N1B4 723 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 ATP11CQ8NB49 1132 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 LRRC39Q96DD0 335 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 IL12RB2Q99665 862 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 GBA3Q9H227 469 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 TMEM248Q9NWD8 314 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 EFCAB14O75071 495 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 CDH16O75309 829 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 ALDH1A2O94788 518 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 UPP2O95045 317 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 LSP1P33241 339 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 LMAN1P49257 510 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 ALDH7A1P49419 539 aaKnown RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 CDK16Q00536 496 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 KLHDC10Q6PID8 442 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 PPP1R21Q6ZMI0 780 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 TADA2BQ86TJ2 420 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 TRABD2AQ86V40 505 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 RTL3Q8N8U3 475 aaKnown RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 SP7Q8TDD2 431 aaPredicted RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 FBXO32Q969P5 355 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 TBC1D31Q96DN5 1066 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 XPO6Q96QU8 1125 aaKnown RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 CCSER2Q9H7U1 834 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 CNOT10Q9H9A5 744 aaKnown RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 TLR8Q9NR97 1041 aaKnown RBP9.14□□□□□ -0.95
TDP1-210ENST00000554976 SMYD2Q9NRG4 433 aa9.14□□□□□ -0.95
TDP1-210ENST00000554976 TCRBV9S1A1TA0A576 114 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CCDC189A1A4V9 331 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 A6NNZ2 444 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 TBX18O95935 607 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 GSTA2P09210 222 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CCNCP24863 283 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 PSMB4P28070 264 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 EPHB2P29323 1055 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 ACTN2P35609 894 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 IFNAR2P48551 515 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 TBX4P57082 545 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 RPL10AP62906 217 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 GNGT1P63211 74 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 AP1B1Q10567 949 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 IFRD2Q12894 506 aaPredicted RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 RAB33AQ14088 237 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 TUBB8Q3ZCM7 444 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 TTC31Q49AM3 519 aaPredicted RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 DNAJC21Q5F1R6 531 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 SYCP2LQ5T4T6 812 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 TPGS2Q68CL5 300 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CYS1Q717R9 158 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 PDIK1LQ8N165 341 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 UMODL1-AS1Q8N2C9 162 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CNTD1Q8N815 330 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 ZNF461Q8TAF7 563 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 FBF1Q8TES7 1133 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 OXNAD1Q96HP4 312 aaPredicted RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 SEPT5Q99719 369 aaPredicted RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 SLC39A8Q9C0K1 460 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 ZBP1Q9H171 429 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 RXFP1Q9HBX9 757 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 IL23AQ9NPF7 189 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 SUFUQ9UMX1 484 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CHMP2BQ9UQN3 213 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 NOTCH4Q99466 2003 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 ZBTB24O43167 697 aaPredicted RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 LAG3P18627 525 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 OR1D2P34982 312 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 SERPINB6P35237 376 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 SLC18A1P54219 525 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 PRPF39Q86UA1 669 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 DENND1AQ8TEH3 1009 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 PYROXD1Q8WU10 500 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CLP1Q92989 425 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 TADA1Q96BN2 335 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 ZNF558Q96NG5 402 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CEP41Q9BYV8 373 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 CASS4Q9NQ75 786 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 MOCS1Q9NZB8 636 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 PCDHA11Q9Y5I1 949 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 ZNF106Q9H2Y7 1883 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 MKI67P46013 3256 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 OAS1P00973 400 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 HPDP32754 393 aaPredicted RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 TUBP50607 506 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 GEMIN4P57678 1058 aaKnown RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 MGAT5BQ3V5L5 792 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 TEX44Q53QW1 395 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 TTC19Q6DKK2 380 aaPredicted RBP9.13□□□□□ -0.95
TDP1-210ENST00000554976 UNC5AQ6ZN44 842 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 ARHGEF18Q6ZSZ5 1173 aa9.13□□□□□ -0.95
TDP1-210ENST00000554976 MDM1Q8TC05 714 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms