RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 SALL4Q9UJQ4 1053 aa8.3□□□□□ -1.08
LINC01397-201ENST00000554808 FBXO10Q9UK96 956 aa8.3□□□□□ -1.08
LINC01397-201ENST00000554808 EFR3BQ9Y2G0 817 aa8.3□□□□□ -1.08
LINC01397-201ENST00000554808 PCDHA3Q9Y5H8 950 aa8.3□□□□□ -1.08
LINC01397-201ENST00000554808 CAPN6Q9Y6Q1 641 aa8.3□□□□□ -1.08
LINC01397-201ENST00000554808 DUSP10Q9Y6W6 482 aa8.3□□□□□ -1.08
LINC01397-201ENST00000554808 SPAG17Q6Q759 2223 aa8.3□□□□□ -1.08
LINC01397-201ENST00000554808 VPS13AQ96RL7 3174 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 DMDP11532 3685 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ILVBLA1L0T0 632 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 LRRD1A4D1F6 860 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 I6L893 689 aaPredicted RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TIMM44O43615 452 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 NARSO43776 548 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 CREB3O43889 395 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 SRGAP2O75044 1071 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TULP3O75386 442 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ZRANB2O95218 330 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ASLP04424 464 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 KDELR1P24390 212 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 IL1R2P27930 398 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 OR1E1P30953 314 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 GRIA2P42262 883 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 GEMIN4P57678 1058 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 SULT2A1Q06520 285 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TNK2Q07912 1038 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 GRSF1Q12849 480 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ZNF177Q13360 481 aaPredicted RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TFDP2Q14188 446 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 LRRC32Q14392 662 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 PPP2R5EQ16537 467 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 HSF5Q4G112 596 aaPredicted RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 PPP6R3Q5H9R7 873 aaPredicted RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 KCNT1Q5JUK3 1230 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 DGKKQ5KSL6 1271 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 SEL1L2Q5TEA6 688 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 RWDD4Q6NW29 188 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 RFWD3Q6PCD5 774 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TPRG1Q6ZUI0 275 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 RFX8Q6ZV50 586 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 BZW1Q7L1Q6 419 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TRMT11Q7Z4G4 463 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ANKS1BQ7Z6G8 1248 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 METTL3Q86U44 580 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TMEM25Q86YD3 366 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 LRRC49Q8IUZ0 686 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 REXO1L1PQ8IX06 675 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 RCOR2Q8IZ40 523 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 RTL3Q8N8U3 475 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 FAM3CQ92520 227 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 EDAQ92838 391 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ACDQ96AP0 544 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 HES6Q96HZ4 224 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ZNF830Q96NB3 372 aaPredicted RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 P2RY13Q9BPV8 354 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 CALN1Q9BXU9 219 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 MAK16Q9BXY0 300 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 MAGEH1Q9H213 219 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 PCDH18Q9HCL0 1135 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 ANLNQ9NQW6 1124 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 HEBP1Q9NRV9 189 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TRIM10Q9UDY6 481 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 XPO7Q9UIA9 1087 aaKnown RBP8.29□□□□□ -1.08
LINC01397-201ENST00000554808 MUTYHQ9UIF7 546 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TFR2Q9UP52 801 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 TBC1D30Q9Y2I9 924 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 JRKLQ9Y4A0 524 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 RAD54BQ9Y620 910 aa8.29□□□□□ -1.08
LINC01397-201ENST00000554808 A0A0A0MRY4 1105 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 GOLGA6L7A0A1B0GV03 622 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 KANSL1LA0AUZ9 987 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 ZSCAN5CA6NGD5 496 aaPredicted RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 KIF2AO00139 706 aaPredicted RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 SCAMP3O14828 347 aaKnown RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TSPAN3O60637 253 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 KRT1P04264 644 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 ATP5BP06576 529 aaKnown RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 RHOCP08134 193 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 PABPC1P11940 636 aaKnown RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 GOT1P17174 413 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 PTPN7P35236 360 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 GJC1P36383 396 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 OPRD1P41143 372 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TNFRSF4P43489 277 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 VASPP50552 380 aaPredicted RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 ARSEP51690 589 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 NDST2P52849 883 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 PLK1P53350 603 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 VCPP55072 806 aaKnown RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TAS2R40P59535 323 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 RPS24P62847 133 aaKnown RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 DPYSQ14117 519 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 DPYSL3Q14195 570 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 PARP15Q460N3 678 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 RAB6CQ53S08 254 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TFDP3Q5H9I0 405 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms