RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ZNF18P17022 549 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 CD6P30203 668 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 OXCT1P55809 520 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 JAM2P57087 298 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 NOMO3P69849 1222 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZBTB16Q05516 673 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZNF33AQ06730 810 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 LMAN2Q12907 356 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ARID5BQ14865 1188 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 RABGAP1LQ5R372 815 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 RAP1GAP2Q684P5 730 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 TCEAL6Q6IPX3 200 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 SLC23A3Q6PIS1 610 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ADGRD1Q6QNK2 874 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ARCQ7LC44 396 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 NOP9Q86U38 636 aaKnown RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ERICH1Q86X53 443 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 SPNS2Q8IVW8 549 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 LGI2Q8N0V4 545 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 CADM4Q8NFZ8 388 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 OR2T3Q8NH03 318 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 TCEAL3Q969E4 200 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 NT5C3BQ969T7 300 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 C18orf8Q96DM3 657 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 MYEOVQ96EZ4 313 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 PGAP3Q96FM1 320 aaPredicted RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 SIPA1Q96FS4 1042 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZNF419Q96HQ0 510 aaPredicted RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 PRMT1Q99873 361 aaKnown RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 PCED1AQ9H1Q7 454 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 RXFP3Q9NSD7 469 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 KIAA1522Q9P206 1035 aaPredicted RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 STIM2Q9P246 746 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 SUN2Q9UH99 717 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 XPO7Q9UIA9 1087 aaKnown RBP10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 STAP1Q9ULZ2 295 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 PAXBP1Q9Y5B6 917 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 NUMA1Q14980 2115 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 DCDC2BA2VCK2 349 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 H0Y626 953 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 NDUFS2O75306 463 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 GRAP2O75791 330 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 F9P00740 461 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 SRPRAP08240 638 aaKnown RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 ACADMP11310 421 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 ITPKAP23677 461 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 SOX5P35711 763 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 CSKP41240 450 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 TPMTP51580 245 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 ST8SIA6P61647 398 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 CDR2Q01850 454 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 TYRO3Q06418 890 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 MMRN1Q13201 1228 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 DUOXA1Q1HG43 343 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 PROX2Q3B8N5 592 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 TRIM61Q5EBN2 209 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 PITRM1Q5JRX3 1037 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 BRMS1LQ5PSV4 323 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 SYCP2LQ5T4T6 812 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 OTUD1Q5VV17 481 aaPredicted RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 TRIM72Q6ZMU5 477 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 ARMCX6Q7L4S7 300 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 XYLT1Q86Y38 959 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 CFAP52Q8N1V2 620 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 CARNMT1Q8N4J0 409 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 CYB5D2Q8WUJ1 264 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 RNF34Q969K3 372 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 MYO19Q96H55 970 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 ERGIC2Q96RQ1 377 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 PPP1R9BQ96SB3 815 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 NPY6RQ99463 290 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 NUSAP1Q9BXS6 441 aaKnown RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 NAT10Q9H0A0 1025 aaKnown RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 TMEM9BQ9NQ34 198 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 FAM207AQ9NSI2 230 aaPredicted RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 TMEM74BQ9NUR3 256 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 WSB2Q9NYS7 404 aaPredicted RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 SUSD2Q9UGT4 822 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 RABGEF1Q9UJ41 708 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 NOCTQ9UK39 431 aaKnown RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 INTS6Q9UL03 887 aaKnown RBP10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 ITIH6Q6UXX5 1313 aa10.75□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZZEF1O43149 2961 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 PATE3B3GLJ2 98 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 M0QYT0 321 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 CYP1A1P04798 512 aaPredicted RBP10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 MMEP08473 750 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SERPINF2P08697 491 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 HLA-EP13747 358 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 STAT1P42224 750 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 CXCR3P49682 368 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 KLK7P49862 253 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 PLK1P53350 603 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 IRX4P78413 519 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms