RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CYB5D2Q8WUJ1 264 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 BAP1Q92560 729 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 RPRD1AQ96P16 312 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 PCDHB18PQ96TA0 734 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 TBCBQ99426 244 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 AGPAT1Q99943 283 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 ADAM33Q9BZ11 813 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 MKRN2Q9H000 416 aaKnown RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 TKTL2Q9H0I9 626 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 WDCPQ9H6R7 721 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 PRDM16Q9HAZ2 1276 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 SEPT11Q9NVA2 429 aaKnown RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 MBD1Q9UIS9 605 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 HS3ST4Q9Y661 456 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 CEP192Q8TEP8 1941 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 IGHV1OR15-9A0A0B4J2B8 117 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 LRRC53A6NM62 1247 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 C7P10643 843 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 HLA-EP13747 358 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 SDC4P31431 198 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 ID4P47928 161 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 DHPSP49366 369 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 COPAP53621 1224 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 UBASH3AP57075 661 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 ST8SIA6P61647 398 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 RPL6Q02878 288 aaKnown RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 PLEKHG6Q3KR16 790 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 C5orf22Q49AR2 442 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 FSCBQ5H9T9 825 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 TRNP1Q6NT89 227 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 PPP1R2P3Q6NXS1 205 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 LRRC8AQ8IWT6 810 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 C12orf50Q8NA57 414 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 OR2T3Q8NH03 318 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 SLC30A5Q8TAD4 765 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 NETO1Q8TDF5 533 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 PRCCQ92733 491 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 ERLEC1Q96DZ1 483 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 EDEM3Q9BZQ6 932 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 ADAM22Q9P0K1 906 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 USP36Q9P275 1121 aaKnown RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 CDV3Q9UKY7 258 aaKnown RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 INTS6Q9UL03 887 aaKnown RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 CYP8B1Q9UNU6 501 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.47□□□□□ -0.25
SHMT2-211ENST00000554310 GON4LQ3T8J9 2241 aa13.47□□□□□ -0.25
SHMT2-211ENST00000554310 DOCK4Q8N1I0 1966 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 CLDN11O75508 207 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 IGLV3-19P01714 112 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 SRPRAP08240 638 aaKnown RBP13.46□□□□□ -0.25
SHMT2-211ENST00000554310 HOXD12P35452 270 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 PTPN9P43378 593 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 SULT2A1Q06520 285 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 ARID5BQ14865 1188 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 NR1I3Q14994 352 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 FIGNQ5HY92 759 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 LYSMD4Q5XG99 296 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 CXorf57Q6NSI4 855 aaKnown RBP13.46□□□□□ -0.25
SHMT2-211ENST00000554310 IRF2BP2Q7Z5L9 587 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 CIR1Q86X95 450 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-211ENST00000554310 TMPRSS6Q8IU80 811 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 EMC1Q8N766 993 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 FRMD1Q8N878 549 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 C3orf20Q8ND61 904 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 IGSF8Q969P0 613 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 RMDN1Q96DB5 314 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 SIPA1Q96FS4 1042 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 C1orf74Q96LT6 269 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 NAP1L5Q96NT1 182 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-211ENST00000554310 SYT11Q9BT88 431 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 TTYH3Q9C0H2 523 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 DLL3Q9NYJ7 618 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 SUN2Q9UH99 717 aa13.46□□□□□ -0.25
SHMT2-211ENST00000554310 ITIH6Q6UXX5 1313 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 C2CD4BA6NLJ0 364 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 I6L893 689 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ENDOD1O94919 500 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 KRT3P12035 628 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 PDGFRAP16234 1089 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 CD6P30203 668 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 OXTRP30559 389 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 GGCXP38435 758 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 PTGER3P43115 390 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 PLK1P53350 603 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 CDH4P55283 916 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ECT2LQ008S8 904 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ZBTB16Q05516 673 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF177Q13360 481 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 PUM1Q14671 1186 aaKnown RBP eCLIP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 SF3A2Q15428 464 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms