RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 RPRD1AQ96P16 312 aaPredicted RBP11.11□□□□□ -0.63
PNN-203ENST00000554117 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
PNN-203ENST00000554117 NUCKS1Q9H1E3 243 aaKnown RBP11.11□□□□□ -0.63
PNN-203ENST00000554117 RSPH9Q9H1X1 276 aaPredicted RBP11.11□□□□□ -0.63
PNN-203ENST00000554117 CD93Q9NPY3 652 aa11.11□□□□□ -0.63
PNN-203ENST00000554117 FZD4Q9ULV1 537 aa11.11□□□□□ -0.63
PNN-203ENST00000554117 PCDHGC3Q9UN70 934 aa11.11□□□□□ -0.63
PNN-203ENST00000554117 ERVW-1Q9UQF0 538 aa11.11□□□□□ -0.63
PNN-203ENST00000554117 CACNA1BQ00975 2339 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 SHROOM3Q8TF72 1996 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 MAP1BP46821 2468 aaKnown RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 C1QTNF3-AMACRE9PGA6 284 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 SH3BP5O60239 455 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 IL1BP01584 269 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 SLC9A1P19634 815 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 BMP6P22004 513 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 ACSL1P33121 698 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 NOS2P35228 1153 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 RPL34P49207 117 aaKnown RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 CCT8P50990 548 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 SGSHP51688 502 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 RPS24P62847 133 aaKnown RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 KRT83P78385 493 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 NME3Q13232 169 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 RAPGEF1Q13905 1077 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 CST6Q15828 149 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 HLA-BQ31612 363 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 ZC3H12AQ5D1E8 599 aaKnown RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 LRRC31Q6UY01 552 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 PASD1Q8IV76 773 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 TMEM35BQ8NCS4 154 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 C1orf131Q8NDD1 294 aaKnown RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 OR8D1Q8WZ84 308 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 SLC39A13Q96H72 371 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 MUC3BQ9H195 1237 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 NUP62CLQ9H1M0 184 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 PABPC3Q9H361 631 aaKnown RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 C6orf106Q9H6K1 298 aaPredicted RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 OSGEPQ9NPF4 335 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 DNAJC12Q9UKB3 198 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.1□□□□□ -0.63
PNN-203ENST00000554117 MSRB2Q9Y3D2 182 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 PCDHGB2Q9Y5G2 931 aa11.1□□□□□ -0.63
PNN-203ENST00000554117 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 GOLGA6L22H0YM25 854 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 YKT6O15498 198 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 PAPSS1O43252 624 aaPredicted RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 HYAL3O43820 417 aaPredicted RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 SIN3BO75182 1162 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 F9P00740 461 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 CALCAP01258 141 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 CD59P13987 128 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 DESP17661 470 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 C5AR1P21730 350 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 SLC8A1P32418 973 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 NUDT1P36639 197 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 GRK6P43250 576 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 RECQLP46063 649 aaPredicted RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 PSMD8P48556 350 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 CSNK1EP49674 416 aaKnown RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 RACK1P63244 317 aaKnown RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 SLC6A3Q01959 620 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 ELAVL3Q14576 367 aaKnown RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 ARID5BQ14865 1188 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 SYCP1Q15431 976 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 PTPRNQ16849 979 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 VWA3BQ502W6 1294 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 HS1BP3Q53T59 392 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 SYPL2Q5VXT5 272 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 KIAA0895LQ68EN5 471 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 PRPF39Q86UA1 669 aaKnown RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 MMAAQ8IVH4 418 aaKnown RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 DEFB106AQ8N104 65 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 CCAR2Q8N163 923 aaKnown RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 GALNT15Q8N3T1 639 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 OXR1Q8N573 874 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 OR2I1PQ8NGU4 316 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 OR2T34Q8NGX1 318 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 ZCCHC14Q8WYQ9 949 aaKnown RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 IGSF8Q969P0 613 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 BIRC7Q96CA5 298 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 PRICKLE1Q96MT3 831 aaPredicted RBP11.09□□□□□ -0.63
PNN-203ENST00000554117 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 ZSWIM1Q9BR11 485 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 TUBGCP2Q9BSJ2 902 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 NDST4Q9H3R1 872 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 WDCPQ9H6R7 721 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 DYRK4Q9NR20 520 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 VPS28Q9UK41 221 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 ANKRD6Q9Y2G4 727 aa11.09□□□□□ -0.63
PNN-203ENST00000554117 LRRK1Q38SD2 2015 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3DA0A087WVF3 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3IA0A087WXS9 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3EA0A087X179 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3KA0A087X1G2 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 A0A1B0GVT2 93 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 A0A1W2PP55 124 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms