RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 TOP3BO95985 862 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DNTTP04053 509 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLC2A3P11169 496 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CD59P13987 128 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ABCB4P21439 1286 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CCR1P32246 355 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ANP32AP39687 249 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 BPIFB4P59827 614 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ECT2LQ008S8 904 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ZBTB16Q05516 673 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 GRIK2Q13002 908 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 NME3Q13232 169 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 HNRNPA1L2Q32P51 320 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 TCP11X2Q5H9J9 407 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 KLHDC7AQ5VTJ3 777 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ZNF776Q68DI1 518 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SMYD5Q6GMV2 418 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FBXL22Q6P050 247 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CLEC17AQ6ZS10 378 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CCAR2Q8N163 923 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 C1orf216Q8TAB5 229 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SNX19Q92543 992 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 RPL10LQ96L21 214 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 NAA15Q9BXJ9 866 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 RSPH9Q9H1X1 276 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLC32A1Q9H598 525 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DNAAF2Q9NVR5 837 aaKnown RBP12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 TAB2Q9NYJ8 693 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CEP83Q9Y592 693 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PKD1L2Q7Z442 2459 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 LAMA5O15230 3695 aa12.27□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DAB1O75553 588 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 GJB3O75712 270 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 MOCS3O95396 460 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 SEMA4FO95754 770 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 SRPRAP08240 638 aaKnown RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 CYP11B1P15538 503 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 PDGFRAP16234 1089 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 SPINK2P20155 84 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 EEF1GP26641 437 aaKnown RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 MZF1P28698 734 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 STK19P49842 368 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 IRAK1P51617 712 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 SNX16P57768 344 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 RNASE9P60153 205 aaKnown RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 FAM193AP78312 1265 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 BNC1Q01954 994 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 CENPCQ03188 943 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 ARID5BQ14865 1188 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 TTC31Q49AM3 519 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 RABGAP1LQ5R372 815 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 C9orf64Q5T6V5 341 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 OTUD1Q5VV17 481 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 TAF3Q5VWG9 929 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 SLC26A9Q7LBE3 791 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 C14orf80Q86SX3 495 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 KDM1BQ8NB78 822 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 GANCQ8TET4 914 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 IGSF8Q969P0 613 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 CAMK1GQ96NX5 476 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 BTBD1Q9H0C5 482 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 PCED1AQ9H1Q7 454 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 PABPC3Q9H361 631 aaKnown RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 VANGL2Q9ULK5 521 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 WASF3Q9UPY6 502 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 HS3ST4Q9Y661 456 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 ITPR1Q14643 2758 aa12.27□□□□□ -0.45
TRAPPC6B-204ENST00000554018 EDDM13A0A1B0GTR0 161 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 TARSL2A2RTX5 802 aaKnown RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 M0QYT0 321 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 MID1O15344 667 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 SH3BP5O60239 455 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 RNASEH1O60930 286 aaKnown RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 PAGE1O75459 146 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 FSBPO95073 299 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 UCHL3P15374 230 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 TFE3P19532 575 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 CDH5P33151 784 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 NOS2P35228 1153 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 GGCXP38435 758 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 MATKP42679 507 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 CSNK1EP49674 416 aaKnown RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 SIM1P81133 766 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 AUHQ13825 339 aaKnown RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 ST3GAL2Q16842 350 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 CT47A1Q5JQC4 288 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 RNF219Q5W0B1 726 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 CXorf57Q6NSI4 855 aaKnown RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 MMAAQ8IVH4 418 aaKnown RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 TMEM35BQ8NCS4 154 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 GPT2Q8TD30 523 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 C18orf8Q96DM3 657 aa12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 RPRD1AQ96P16 312 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC6B-204ENST00000554018 FAM129BQ96TA1 746 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms