RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 FNTAP49354 379 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 YBEYP58557 167 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 ZNF33AQ06730 810 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 NR1H3Q13133 447 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 ZNF177Q13360 481 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 XRCC4Q13426 336 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 PDK1Q15118 436 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 NOMO1Q15155 1222 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 PREPLQ4J6C6 727 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 PTCRAQ6ISU1 281 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 CCDC70Q6NSX1 233 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 AADACL2Q6P093 401 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 RFWD3Q6PCD5 774 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 DRICH1Q6PGQ1 229 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 C14orf80Q86SX3 495 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 NLRP14Q86W24 1093 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 CDKL3Q8IVW4 592 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 ZDHHC14Q8IZN3 488 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 UMODL1-AS1Q8N2C9 162 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 PQLC3Q8N755 202 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 PLD5Q8N7P1 536 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 MS4A14Q96JA4 679 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 SLC2A11Q9BYW1 496 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 HAUS2Q9NVX0 235 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 IGSF9Q9P2J2 1179 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 FEZ2Q9UHY8 353 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 SNX10Q9Y5X0 201 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
SHMT2-210ENST00000553950 NYNRINQ9P2P1 1898 aaKnown RBP14.91□□□□□ -0.02
SHMT2-210ENST00000553950 COL4A3Q01955 1670 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 NUP205Q92621 2012 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 TICRRQ7Z2Z1 1910 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 GOLGA6L7A0A1B0GV03 622 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 ARHGAP42A6NI28 874 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 ANHXE9PGG2 379 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 H0Y626 953 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 CHADO15335 359 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 HOXC11O43248 304 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-210ENST00000553950 MTSS1O43312 755 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 MFSD11O43934 449 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 RAMP2O60895 175 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 TBL1XO60907 577 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 PENKP01210 267 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-210ENST00000553950 RHOCP08134 193 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 VIPR2P41587 438 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 OTUD4Q01804 1114 aaKnown RBP14.9□□□□□ -0.02
SHMT2-210ENST00000553950 GAD2Q05329 585 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 SLC12A1Q13621 1099 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 HTR4Q13639 388 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 CCNG2Q16589 344 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 CYP1B1Q16678 543 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 RNF43Q68DV7 783 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 TIGD7Q6NT04 549 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-210ENST00000553950 VITQ6UXI7 678 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 MFN1Q8IWA4 741 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 ATPAF2Q8N5M1 289 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 IRF7Q92985 503 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 IGSF8Q969P0 613 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 WBP2Q969T9 261 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 EXOC4Q96A65 974 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 XPO6Q96QU8 1125 aaKnown RBP14.9□□□□□ -0.02
SHMT2-210ENST00000553950 TRMT61BQ9BVS5 477 aaKnown RBP14.9□□□□□ -0.02
SHMT2-210ENST00000553950 BBS2Q9BXC9 721 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 MAGEH1Q9H213 219 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 HEY1Q9Y5J3 304 aa14.9□□□□□ -0.02
SHMT2-210ENST00000553950 MYOFQ9NZM1 2061 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 ILVBLA1L0T0 632 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 ADH5P11766 374 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 HOXD9P28356 352 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-210ENST00000553950 VCPP55072 806 aaKnown RBP14.89□□□□□ -0.03
SHMT2-210ENST00000553950 RPS24P62847 133 aaKnown RBP14.89□□□□□ -0.03
SHMT2-210ENST00000553950 GALNT2Q10471 571 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 EML3Q32P44 896 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 TANGO2Q6ICL3 276 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 TFAP2DQ7Z6R9 452 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 SPATA4Q8NEY3 305 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 RIN3Q8TB24 985 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 ACTL9Q8TC94 416 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 NKD2Q969F2 451 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-210ENST00000553950 HDAC11Q96DB2 347 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 LRRC19Q9H756 370 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 DTLQ9NZJ0 730 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 MPP6Q9NZW5 540 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 THEGQ9P2T0 379 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 PRKAG3Q9UGI9 489 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 TBC1D30Q9Y2I9 924 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 NUMBLQ9Y6R0 609 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 MIA3Q5JRA6 1907 aa14.89□□□□□ -0.03
SHMT2-210ENST00000553950 CXorf51AA0A1B0GTR3 108 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 C2CD4DB7Z1M9 353 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 NEDD8-MDP1E9PL57 170 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 LIASO43766 372 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 CACNG3O60359 315 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 TSPAN3O60637 253 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 STK10O94804 968 aaKnown RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 GAS8O95995 478 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 CYP17A1P05093 508 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 EIF3EP60228 445 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms