RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RASSF2P50749 326 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 DLX5P56178 289 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 KRTAP10-3P60369 221 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 COASYQ13057 564 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 CNN3Q15417 329 aaKnown RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 C3orf38Q5JPI3 329 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 Q5PR19 223 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 ZNF280DQ6N043 979 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 CCDC174Q6PII3 467 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 SPSB3Q6PJ21 355 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 PARM1Q6UWI2 310 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 KYAT3Q6YP21 454 aaKnown RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 MMS22LQ6ZRQ5 1243 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 CLASRPQ8N2M8 674 aaKnown RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 C7orf57Q8NEG2 295 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 MBD3L2Q8NHZ7 208 aaPredicted RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 SMCR8Q8TEV9 937 aaPredicted RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 CCT6BQ92526 530 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 KAT2BQ92831 832 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 FAM227BQ96M60 508 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 NEUROD6Q96NK8 337 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 EIF2AK1Q9BQI3 630 aaKnown RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 ELOVL1Q9BW60 279 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 DCLK3Q9C098 648 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 TMEM60Q9H2L4 133 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 TASP1Q9H6P5 420 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 FAM204AQ9H8W3 233 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 RXFP3Q9NSD7 469 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 C1orf112Q9NSG2 853 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 C9orf78Q9NZ63 289 aaPredicted RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 AFF4Q9UHB7 1163 aaKnown RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 MAGED2Q9UNF1 606 aaPredicted RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 LAMP3Q9UQV4 416 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 PCDHB2Q9Y5E7 798 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 PCDHGB6Q9Y5F9 930 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 PTGDR2Q9Y5Y4 395 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 EMSYQ7Z589 1322 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 A0A1B0GVT2 93 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 ISM1B1AKI9 464 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 RGS14O43566 566 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 AGR2O95994 175 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 LCATP04180 440 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 LDHCP07864 332 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 STAT6P42226 847 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 MAPK9P45984 424 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 PCYT1AP49585 367 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 DGKQP52824 942 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 AK2P54819 239 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 RPS16P62249 146 aaKnown RBP2.64□□□□□ -1.99
SRP54-204ENST00000553923 TRAF1Q13077 416 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 GPS2Q13227 327 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 GALEQ14376 348 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 PDCD2Q16342 344 aaPredicted RBP2.64□□□□□ -1.99
SRP54-204ENST00000553923 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.64□□□□□ -1.99
SRP54-204ENST00000553923 KIAA1755Q5JYT7 1200 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 LIPMQ5VYY2 423 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 FAM90A2PQ658T7 463 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 MZT2AQ6P582 158 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 APOA5Q6Q788 366 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 TOGARAM2Q6ZUX3 1019 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 MAATS1Q7Z4T9 603 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 YAF2Q8IY57 180 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 KIAA0319LQ8IZA0 1049 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 FAM156AQ8NDB6 213 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 CENPIQ92674 756 aaPredicted RBP2.64□□□□□ -1.99
SRP54-204ENST00000553923 CLMNQ96JQ2 1002 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 CCDC138Q96M89 665 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 DOCK7Q96N67 2140 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 WDR24Q96S15 920 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 CRB3Q9BUF7 120 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 CDT1Q9H211 546 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 IL21RQ9HBE5 538 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 OGDHLQ9ULD0 1010 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 TPCN1Q9ULQ1 816 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 HPSEQ9Y251 543 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 DGKBQ9Y6T7 804 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 SCINQ9Y6U3 715 aa2.64□□□□□ -1.99
SRP54-204ENST00000553923 KIF26BQ2KJY2 2108 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 ABHD14A-ACY1A0A1B0GW23 586 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 OR6C75A6NL08 312 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 A6NNZ2 444 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 TTC34A8MYJ7 566 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 TPP1O14773 563 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 EPB41L2O43491 1005 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 FRS3O43559 492 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 SPRY3O43610 288 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 IL18RAPO95256 599 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 ZBTB11O95625 1053 aaPredicted RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 KLKB1P03952 638 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 AKR1A1P14550 325 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 CPA1P15085 419 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 MATN1P21941 496 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 HOXD3P31249 432 aaPredicted RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 CHKAP35790 457 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 KCNJ4P48050 445 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 AGTR2P50052 363 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 GAD2Q05329 585 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 TOMM20Q15388 145 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms