RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 KRT18P05783 430 aaKnown RBP4.45□□□□□ -1.7
SCFD1-210ENST00000553693 AKT1P31749 480 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 MLH1P40692 756 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 RFX2P48378 723 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 RPL15P61313 204 aaKnown RBP4.45□□□□□ -1.7
SCFD1-210ENST00000553693 EGR4Q05215 589 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 PMPCAQ10713 525 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 ZNF585BQ52M93 769 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 ZNF569Q5MCW4 686 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 RINT1Q6NUQ1 792 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 PARM1Q6UWI2 310 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 IQCF1Q8N6M8 205 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 DEPTORQ8TB45 409 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 MUL1Q969V5 352 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 MIB2Q96AX9 1013 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 TNIP3Q96KP6 325 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 PRPF18Q99633 342 aaKnown RBP4.45□□□□□ -1.7
SCFD1-210ENST00000553693 MYD88Q99836 296 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 TMEM120AQ9BXJ8 343 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 OSBPL5Q9H0X9 879 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-210ENST00000553693 TXNRD2Q9NNW7 524 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 SIRT3Q9NTG7 399 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-210ENST00000553693 RNF146Q9NTX7 359 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 PLK2Q9NYY3 685 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 TRPC5Q9UL62 973 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-210ENST00000553693 PHTF1Q9UMS5 762 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 CYP3A7-CYP3A51PA0A087WV96 503 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3DA0A087WVF3 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3IA0A087WXS9 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3EA0A087X179 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3KA0A087X1G2 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3BA6NDS4 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 CXorf65A6NEN9 183 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3FA6NER0 549 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-210ENST00000553693 C4orf47A7E2U8 309 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3LB9A6J9 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 MCIDASD6RGH6 385 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 M0QYT0 321 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 PIP5K1BO14986 540 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 MYL1P05976 194 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3HP0C7X1 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 CYP3A7P24462 503 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 KLRK1P26718 216 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 BTKQ06187 659 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 HSP90AB2PQ58FF8 381 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3GQ6DHY5 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3CQ6IPX1 549 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 MDGA2Q7Z553 956 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-210ENST00000553693 IGFN1Q86VF2 1251 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D3Q8IZP1 549 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-210ENST00000553693 EXD3Q8N9H8 876 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 C7orf57Q8NEG2 295 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 PARD3BQ8TEW8 1205 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 KAT2AQ92830 837 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 INPP5DQ92835 1189 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 KIAA1191Q96A73 305 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 MCRS1Q96EZ8 462 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 ADAD1Q96M93 576 aaKnown RBP4.44□□□□□ -1.7
SCFD1-210ENST00000553693 CTAGE1Q96RT6 745 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TP63Q9H3D4 680 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-210ENST00000553693 MAP6D1Q9H9H5 199 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 KRCC1Q9NPI7 259 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-210ENST00000553693 TBC1D14Q9P2M4 693 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 RAB21Q9UL25 225 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 RB1CC1Q8TDY2 1594 aa4.44□□□□□ -1.7
SCFD1-210ENST00000553693 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-210ENST00000553693 CYSRT1A8MQ03 144 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 KCNJ18B7U540 433 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 KIF28PB7ZC32 967 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 PRSS44E7EML9 344 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 SLC28A2O43868 658 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 NEURL1O76050 574 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 LARGE1O95461 756 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 ENTPD1P49961 510 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 RASSF2P50749 326 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 FOXL2P58012 376 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 RBM6P78332 1123 aaKnown RBP4.43□□□□□ -1.7
SCFD1-210ENST00000553693 ROR2Q01974 943 aaKnown RBP4.43□□□□□ -1.7
SCFD1-210ENST00000553693 SF3A3Q12874 501 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCFD1-210ENST00000553693 ASIC2Q16515 512 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 Q5PR19 223 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 C18orf65Q6ZTR6 163 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 KLBQ86Z14 1044 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 SYTL1Q8IYJ3 562 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 FAM185AQ8N0U4 392 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 OIT3Q8WWZ8 545 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 RSC1A1Q92681 617 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 C18orf8Q96DM3 657 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 ZNF419Q96HQ0 510 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-210ENST00000553693 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-210ENST00000553693 ISCUQ9H1K1 167 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 SLCO5A1Q9H2Y9 848 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 WNT16Q9UBV4 365 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 ZNF112Q9UJU3 913 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 MYO6Q9UM54 1294 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 PROCRQ9UNN8 238 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 SLC12A4Q9UP95 1085 aa4.43□□□□□ -1.7
SCFD1-210ENST00000553693 ASNA1O43681 348 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 CPA1P15085 419 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms