RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CYB5D2Q8WUJ1 264 aa12.27□□□□□ -0.45
SRP54-203ENST00000553544 TMA16Q96EY4 203 aaKnown RBP12.27□□□□□ -0.45
SRP54-203ENST00000553544 CNGB3Q9NQW8 809 aa12.27□□□□□ -0.45
SRP54-203ENST00000553544 SCML1Q9UN30 329 aa12.27□□□□□ -0.45
SRP54-203ENST00000553544 PTPRQQ9UMZ3 2332 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 A0A1W2PPC4 97 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 GTPBP10A4D1E9 387 aaKnown RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 FAM47DPA6NHR8 397 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 YJEFN3A6XGL0 299 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 E7ENQ6 273 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 YKT6O15498 198 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 RNASEH1O60930 286 aaKnown RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 CALCAP01258 141 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 IGHV4-34P06331 123 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 SLC9A1P19634 815 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 BRD2P25440 801 aaKnown RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 ACTN2P35609 894 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 RPL34P49207 117 aaKnown RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 ARRB1P49407 418 aaPredicted RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 DAOAP59103 153 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 ZNF445P59923 1031 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 DNAJC3Q13217 504 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 ILKQ13418 452 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 HES3Q5TGS1 186 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 BSPRYQ5W0U4 402 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 USP30Q70CQ3 517 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 CHST9Q7L1S5 443 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 ENOSF1Q7L5Y1 443 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 ADIPOR2Q86V24 386 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 FAM217AQ8IXS0 508 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 EID2Q8N6I1 236 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 ZNF366Q8N895 744 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 SNIP1Q8TAD8 396 aaKnown RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 SAP25Q8TEE9 199 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 PLD4Q96BZ4 506 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 HSFY1Q96LI6 401 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 CRACR2AQ9BSW2 395 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 THAP9Q9H5L6 903 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 UBE2TQ9NPD8 197 aaPredicted RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 OLA1Q9NTK5 396 aaKnown RBP12.26□□□□□ -0.45
SRP54-203ENST00000553544 NUMA1Q14980 2115 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 MGAQ8IWI9 3026 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 NAV2Q8IVL1 2488 aa12.26□□□□□ -0.45
SRP54-203ENST00000553544 M0QYV0 167 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 CBX4O00257 560 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 DLDP09622 509 aaKnown RBP12.25□□□□□ -0.45
SRP54-203ENST00000553544 POLR2EP19388 210 aaKnown RBP12.25□□□□□ -0.45
SRP54-203ENST00000553544 HOXD9P28356 352 aaPredicted RBP12.25□□□□□ -0.45
SRP54-203ENST00000553544 HLA-FP30511 346 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 GPD2P43304 727 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 RGS7P49802 495 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 GALCP54803 685 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 CLDN6P56747 220 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 TRIP4Q15650 581 aaPredicted RBP12.25□□□□□ -0.45
SRP54-203ENST00000553544 MEA1Q16626 185 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
SRP54-203ENST00000553544 FBXL19Q6PCT2 694 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 GBP6Q6ZN66 633 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 KIAA0907Q7Z7F0 614 aaPredicted RBP12.25□□□□□ -0.45
SRP54-203ENST00000553544 AHI1Q8N157 1196 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 SIX6OS1Q8N1H7 587 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 CACTIN-AS1Q8N1I8 211 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 IRGQQ8WZA9 623 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 TSC1Q92574 1164 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 FAM81BQ96LP2 452 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 GDF3Q9NR23 364 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 AASDHPPTQ9NRN7 309 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 ABCC13Q9NSE7 274 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 ABCB8Q9NUT2 735 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 FBXL12Q9NXK8 326 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
SRP54-203ENST00000553544 LRRC72A6NJI9 287 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 BECN2A8MW95 431 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 ERVH48-1M5A8F1 160 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 PABPC1P11940 636 aaKnown RBP12.24□□□□□ -0.45
SRP54-203ENST00000553544 LCP1P13796 627 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 CKMT2P17540 419 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 PON1P27169 355 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 CD38P28907 300 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 ACADVLP49748 655 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 CXADRP78310 365 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 APBA1Q02410 837 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 CCDC173Q0VFZ6 552 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 SHBQ15464 509 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 MAN2A1Q16706 1144 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 EXOC3L4Q17RC7 722 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 TAF1BQ53T94 588 aaPredicted RBP12.24□□□□□ -0.45
SRP54-203ENST00000553544 CT47A1Q5JQC4 288 aaPredicted RBP12.24□□□□□ -0.45
SRP54-203ENST00000553544 ADGRF1Q5T601 910 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 MBLAC2Q68D91 279 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 DPY19L2P1Q6NXN4 242 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 MSANTD2Q6P1R3 559 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 GJB7Q6PEY0 223 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 RBM43Q6ZSC3 357 aaKnown RBP12.24□□□□□ -0.45
SRP54-203ENST00000553544 CREBRFQ8IUR6 639 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms