RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 SPTLC2O15270 562 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 TMPRSS11DO60235 418 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 CCNT1O60563 726 aaKnown RBP4.26□□□□□ -1.73
PCNX4-206ENST00000553513 VNN1O95497 513 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 LATS1O95835 1130 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 ALDOAP04075 364 aaKnown RBP4.26□□□□□ -1.73
PCNX4-206ENST00000553513 PNPLA4P41247 253 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 GPD2P43304 727 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 CCR9P51686 369 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 SEC23BQ15437 767 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 TSTQ16762 297 aaKnown RBP4.26□□□□□ -1.73
PCNX4-206ENST00000553513 AAK1Q2M2I8 961 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 ZNF484Q5JVG2 852 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 WDR45BQ5MNZ6 344 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 FAM69AQ5T7M9 428 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 SPATA1Q5VX52 437 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 ZNF280DQ6N043 979 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 KIRREL2Q6UWL6 708 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 ATF7IPQ6VMQ6 1270 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 PIK3AP1Q6ZUJ8 805 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 RASGRP2Q7LDG7 609 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 R3HCC1LQ7Z5L2 792 aaKnown RBP4.26□□□□□ -1.73
PCNX4-206ENST00000553513 PTGR2Q8N8N7 351 aaPredicted RBP4.26□□□□□ -1.73
PCNX4-206ENST00000553513 ADAMTS15Q8TE58 950 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 SMG7Q92540 1137 aaKnown RBP4.26□□□□□ -1.73
PCNX4-206ENST00000553513 SH3KBP1Q96B97 665 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 APOPT1Q96IL0 206 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 CD180Q99467 661 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 MACROD1Q9BQ69 325 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 PAAF1Q9BRP4 392 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 THAP7Q9BT49 309 aaPredicted RBP4.26□□□□□ -1.73
PCNX4-206ENST00000553513 RMI1Q9H9A7 625 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 PLEKHA2Q9HB19 425 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 PDE11AQ9HCR9 933 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 MGAT4CQ9UBM8 478 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 SLC25A13Q9UJS0 675 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 HSF4Q9ULV5 492 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 CAMK2AQ9UQM7 478 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 PCDHA10Q9Y5I2 948 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 CYP46A1Q9Y6A2 500 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 FER1L4A9Z1Z3 1794 aa4.26□□□□□ -1.73
PCNX4-206ENST00000553513 COL3A1P02461 1466 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 PGPEP1LA6NFU8 196 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 C3orf70A6NLC5 250 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 TTC34A8MYJ7 566 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 B4DLN1 442 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 AP3D1O14617 1153 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 ZNF500O60304 480 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 PMPCBO75439 489 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 GFPT2O94808 682 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 NHLRC4P0CG21 123 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 ALADP13716 330 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 MATN1P21941 496 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 RPS6KB1P23443 525 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 EPHB2P29323 1055 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 GKP32189 559 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 HTR7P34969 479 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 IGHMBP2P38935 993 aaKnown RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 ARL1P40616 181 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 POLD2P49005 469 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 DCAF7P61962 342 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 E2F1Q01094 437 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 SETQ01105 290 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CCDC15Q0P6D6 951 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CCNG2Q16589 344 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 BAK1Q16611 211 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CYP1B1Q16678 543 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CERKLQ49MI3 558 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 SLC45A4Q5BKX6 768 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CBWD5Q5RIA9 395 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CFAP58Q5T655 872 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 SLC9C2Q5TAH2 1124 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 MFSD4BQ5TF39 518 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 DENND1BQ6P3S1 775 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 ZNF66Q6ZN08 573 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CCDC129Q6ZRS4 1044 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 METTL25Q8N6Q8 603 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 TERB1Q8NA31 727 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 PNLDC1Q8NA58 520 aaKnown RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 SRFBP1Q8NEF9 429 aaKnown RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 LINS1Q8NG48 757 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 ARRDC3Q96B67 414 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 MCRS1Q96EZ8 462 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 LENG8Q96PV6 779 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 ASB2Q96Q27 587 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 SNX18Q96RF0 628 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 PRR25Q96S07 402 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 TREX2Q9BQ50 279 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 CLPBQ9H078 707 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 USP29Q9HBJ7 922 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 NRIP3Q9NQ35 241 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 EIF2B3Q9NR50 452 aaKnown RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 HAUS2Q9NVX0 235 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 NSMCE4AQ9NXX6 385 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 TFCP2L1Q9NZI6 479 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 BCCIPQ9P287 314 aaKnown RBP eCLIP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 ZNF70Q9UC06 446 aaPredicted RBP4.25□□□□□ -1.73
PCNX4-206ENST00000553513 VPS4AQ9UN37 437 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 TTLL3Q9Y4R7 772 aa4.25□□□□□ -1.73
PCNX4-206ENST00000553513 PCDHB2Q9Y5E7 798 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms