RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TNFRSF10AO00220 468 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 KRT7P08729 469 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 ALADP13716 330 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 RHOQP17081 205 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 CTNNA2P26232 953 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 TARSP26639 723 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 CD70P32970 193 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 CTNNA1P35221 906 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 ZNF135P52742 658 aaPredicted RBP15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 LMAN2Q12907 356 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 PON2Q15165 354 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 GEN1Q17RS7 908 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 CWF19L1Q69YN2 538 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 C1orf228Q6PIY5 440 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 LRRC31Q6UY01 552 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 RFX8Q6ZV50 586 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 RHOT1Q8IXI2 618 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 TERB1Q8NA31 727 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 ALG3Q92685 438 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 CSPG4P5Q96PW8 444 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 EPAS1Q99814 870 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 EPHX3Q9H6B9 360 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 RETREG1Q9H6L5 497 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 TBC1D17Q9HA65 648 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 LTB4R2Q9NPC1 389 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 ARHGEF4Q9NR80 690 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 ETNK2Q9NVF9 386 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 DEC1Q9P2X7 70 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 FBXL21Q9UKT6 434 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 KANSL1LA0AUZ9 987 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 ZNF487B1APH4 448 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 MAN2B1O00754 1011 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 DCLK1O15075 740 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 SPOPO43791 374 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 CREB3O43889 395 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 KAT7O95251 611 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 CHRNB1P11230 501 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 KDELR1P24390 212 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 DGKGP49619 791 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 PLK1P53350 603 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 KDSRQ06136 332 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 PPP6R3Q5H9R7 873 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 AFMIDQ63HM1 303 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 GRAMD4Q6IC98 578 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 TFAP2DQ7Z6R9 452 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 ADIPOR2Q86V24 386 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 VSIG1Q86XK7 387 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 MFN1Q8IWA4 741 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 KATNAL2Q8IYT4 538 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 PQLC3Q8N755 202 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 RTL3Q8N8U3 475 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 FAM3CQ92520 227 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 HES6Q96HZ4 224 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 XPO6Q96QU8 1125 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 PNKPQ96T60 521 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 FOXQ1Q9C009 403 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 RCOR3Q9P2K3 495 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 MFHAS1Q9Y4C4 1052 aa15.27■□□□□ 0.04
MTHFD1-204ENST00000553405 TMEM221A6NGB7 291 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 M0R296 226 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 EEF2KO00418 725 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 ZSCAN12O43309 604 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 FTCDO95954 541 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 EGFP01133 1207 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 EPHB2P29323 1055 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 GJC1P36383 396 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 GRIA2P42262 883 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 SSR1P43307 286 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 MAPKAPK2P49137 400 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 CDH6P55285 790 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 TPI1P60174 286 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 AMPD2Q01433 879 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 MMRN1Q13201 1228 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 PDK2Q15119 407 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 FUT11Q495W5 492 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 DCAF12L1Q5VU92 463 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 ZNF852Q6ZMS4 543 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 ARHGAP12Q8IWW6 846 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 SUGP1Q8IWZ8 645 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 CCDC105Q8IYK2 499 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 UMODL1-AS1Q8N2C9 162 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 CARNMT1Q8N4J0 409 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 NPWQ8N729 165 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 PCDH19Q8TAB3 1148 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 CLDN23Q96B33 292 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 SHDQ96IW2 340 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 ZNF670Q9BS34 389 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 ABCB8Q9NUT2 735 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 DLGAP2Q9P1A6 1054 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 STARD13Q9Y3M8 1113 aa15.26■□□□□ 0.03
MTHFD1-204ENST00000553405 FGF10O15520 208 aaPredicted RBP15.25■□□□□ 0.03
MTHFD1-204ENST00000553405 PABPC1P11940 636 aaKnown RBP15.25■□□□□ 0.03
MTHFD1-204ENST00000553405 ERCC2P18074 760 aa15.25■□□□□ 0.03
MTHFD1-204ENST00000553405 DRD1P21728 446 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms