RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TRPM6Q9BX84 2022 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 ARID1BQ8NFD5 2236 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-208ENST00000553370 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
ACTN1-208ENST00000553370 BPTFQ12830 3046 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 GOLGA6L7A0A1B0GV03 622 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 TRIM49BA6NDI0 452 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 LRRC72A6NJI9 287 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 SART1O43290 800 aaKnown RBP10.28□□□□□ -0.76
ACTN1-208ENST00000553370 ACSL4O60488 711 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 ASLP04424 464 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 CD27P26842 260 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 CD70P32970 193 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 NNMTP40261 264 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 PSMD8P48556 350 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 FMO5P49326 533 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 SGSHP51688 502 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 ACAP1Q15027 740 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 SLC45A4Q5BKX6 768 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 KIAA0895LQ68EN5 471 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 ANKRD40Q6AI12 368 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 KLHL10Q6JEL2 608 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 BRICD5Q6PL45 260 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 LCLAT1Q6UWP7 414 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 CCNI2Q6ZMN8 369 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-208ENST00000553370 GLRX5Q86SX6 157 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 ADIPOR2Q86V24 386 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 CHSY1Q86X52 802 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 RBBP8NLQ8NC74 664 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-208ENST00000553370 MDM1Q8TC05 714 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 KCTD13Q8WZ19 329 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 IGSF8Q969P0 613 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 BIRC7Q96CA5 298 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 GSDMAQ96QA5 445 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 TMEM245Q9H330 911 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 PABPC3Q9H361 631 aaKnown RBP10.28□□□□□ -0.76
ACTN1-208ENST00000553370 PRSS16Q9NQE7 514 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 FBXL12Q9NXK8 326 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 SCML1Q9UN30 329 aa10.28□□□□□ -0.76
ACTN1-208ENST00000553370 FAM221BA6H8Z2 402 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 TNFSF14O43557 240 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 DFNA5O60443 496 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 ATXN1LP0C7T5 689 aaKnown RBP10.27□□□□□ -0.77
ACTN1-208ENST00000553370 HNF1BP35680 557 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 CSKP41240 450 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 MPP7Q5T2T1 576 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 PIK3R6Q5UE93 754 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 PMF1Q6P1K2 205 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 MSANTD2Q6P1R3 559 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 BHLHA9Q7RTU4 235 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 SLCO6A1Q86UG4 719 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 LGI2Q8N0V4 545 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.27□□□□□ -0.77
ACTN1-208ENST00000553370 ADAM32Q8TC27 787 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 WFDC5Q8TCV5 224 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 CLEC4CQ8WTT0 213 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 RNF34Q969K3 372 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-208ENST00000553370 FAM204AQ9H8W3 233 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 SLC12A6Q9UHW9 1150 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 STOML2Q9UJZ1 356 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 RAXQ9Y2V3 346 aa10.27□□□□□ -0.77
ACTN1-208ENST00000553370 COL5A1P20908 1838 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-208ENST00000553370 PTPRQQ9UMZ3 2332 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 SYNJ2BP-COX16A0A087WUM0 186 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 EDDM13A0A1B0GTR0 161 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 A0A1W2PP55 124 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 BICDL2A1A5D9 508 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 F5H5T6 163 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 H0Y8X5 98 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 KCNK3O14649 394 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 MID1O15344 667 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 MED7O43513 233 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 CBFA2T3O75081 653 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 SIN3BO75182 1162 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 ADH1BP00325 375 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 F12P00748 615 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 ITGAVP06756 1048 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 SLC6A4P31645 630 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 PPP1R2P41236 205 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 ACADSBP45954 432 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 RPS24P62847 133 aaKnown RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 BNC1Q01954 994 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 CST6Q15828 149 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 PTPRNQ16849 979 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 COL28A1Q2UY09 1125 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 ISM2Q6H9L7 571 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 USP30Q70CQ3 517 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 RRAGAQ7L523 313 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 PDZD3Q86UT5 571 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 CREBRFQ8IUR6 639 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 MMAAQ8IVH4 418 aaKnown RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 CFAP52Q8N1V2 620 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 SCML4Q8N228 414 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 DQX1Q8TE96 717 aaKnown RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 TFAP2BQ92481 460 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 ERCC4Q92889 916 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 SLC35C1Q96A29 364 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 HSFY1Q96LI6 401 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms