RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CCT6AP40227 531 aaKnown RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 GALCP54803 685 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 RPS14P62263 151 aaKnown RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CCT2P78371 535 aaKnown RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CYP27A1Q02318 531 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 KLRB1Q12918 225 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 SQSTM1Q13501 440 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CLCA4Q14CN2 919 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 BMT2Q1RMZ1 405 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 SNAP47Q5SQN1 464 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 TTC39BQ5VTQ0 682 aaPredicted RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 HAUS3Q68CZ6 603 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 SLFN12LQ6IEE8 588 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 LIAT1Q6ZQX7 453 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 JAMLQ86YT9 394 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CCNJLQ8IV13 435 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 NUP93Q8N1F7 819 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 SLC25A45Q8N413 288 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 FBXO39Q8N4B4 442 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 TOP6BLQ8N6T0 577 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 FAM169BQ8N8A8 192 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 TEX19Q8NA77 164 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 GOLM1Q8NBJ4 401 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 RBBP8NLQ8NC74 664 aaPredicted RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 GALNT11Q8NCW6 608 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 OR2T34Q8NGX1 318 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 C9orf43Q8TAL5 461 aaPredicted RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 FBXO32Q969P5 355 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF669Q96BR6 464 aaPredicted RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 PRR11Q96HE9 360 aaPredicted RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 TCF12Q99081 682 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 OMDQ99983 421 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ORAI3Q9BRQ5 295 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 MSTO1Q9BUK6 570 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CIPCQ9C0C6 399 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 STRADBQ9C0K7 418 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 FBXL12Q9NXK8 326 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 SALL4Q9UJQ4 1053 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ACSL6Q9UKU0 697 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 KCNJ14Q9UNX9 436 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ENTPD2Q9Y5L3 495 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ABCA2Q9BZC7 2435 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3DA0A087WVF3 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3IA0A087WXS9 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3EA0A087X179 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3KA0A087X1G2 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 A0A0B4J269 797 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 A0A1B0GVM2 712 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 A1L4Q6 167 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 CPED1A4D0V7 1026 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3FA6NER0 549 aaPredicted RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3LB9A6J9 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 GABRDO14764 452 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 PLD2O14939 933 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 NVLO15381 856 aaKnown RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 CAPN5O15484 640 aaPredicted RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TPD52L2O43399 206 aaKnown RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 RNGTTO60942 597 aaKnown RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 CDKL5O76039 1030 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 IL18RAPO95256 599 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 ATP5BP06576 529 aaKnown RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 FAM163BP0C2L3 166 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3HP0C7X1 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 MAPTP10636 758 aaKnown RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 PLS3P13797 630 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 DGKAP23743 735 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 PSMA5P28066 241 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 SLC6A4P31645 630 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 MFAP3P55082 362 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 POLE2P56282 527 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 RBP5P82980 135 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 RELBQ01201 579 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 SEPT6Q14141 434 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 DHX8Q14562 1220 aaKnown RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 NPY5RQ15761 445 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 DCAF6Q58WW2 860 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF776Q68DI1 518 aaPredicted RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3GQ6DHY5 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3CQ6IPX1 549 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 NCEH1Q6PIU2 408 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 BLOC1S2Q6QNY1 142 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 ANKS1BQ7Z6G8 1248 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 CACUL1Q86Y37 369 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 FAM114A1Q8IWE2 563 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TRIM42Q8IWZ5 723 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TBC1D3Q8IZP1 549 aaPredicted RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TMEM130Q8N3G9 435 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 TMEM161BQ8NDZ6 487 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 MYCBPAPQ8TBZ2 947 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 THAP3Q8WTV1 239 aaPredicted RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 WASF1Q92558 559 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 KLHDC7BQ96G42 594 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 APOLD1Q96LR9 279 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 PKMYT1Q99640 499 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF395Q9H8N7 513 aaPredicted RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF71Q9NQZ8 489 aaPredicted RBP5.41□□□□□ -1.54
CKAP4-203ENST00000553039 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms