RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 BYSLQ13895 437 aaKnown RBP11.81□□□□□ -0.52
TMEM116-218ENST00000552839 ZNF423Q2M1K9 1284 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 DCAF6Q58WW2 860 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 PM20D1Q6GTS8 502 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 PDZD3Q86UT5 571 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
TMEM116-218ENST00000552839 CEP76Q8TAP6 659 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 CAMK1GQ96NX5 476 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SERPINB11Q96P15 392 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 EIF3CQ99613 913 aaKnown RBP11.81□□□□□ -0.52
TMEM116-218ENST00000552839 THAP2Q9H0W7 228 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 CCSER2Q9H7U1 834 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 NMUR1Q9HB89 426 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 RRN3Q9NYV6 651 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 MARCH2Q9P0N8 246 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 DNMT3LQ9UJW3 386 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SH3BP1Q9Y3L3 701 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 PAXBP1Q9Y5B6 917 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 CPQQ9Y646 472 aa11.81□□□□□ -0.52
TMEM116-218ENST00000552839 SLC12A8A0AV02 714 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 FAM92AA1XBS5 289 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 ARHGAP33O14559 1287 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 SLC9A3R1O14745 358 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-218ENST00000552839 OLFM2O95897 454 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 APOEP02649 317 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 HMBSP08397 361 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 CCDC175P0C221 793 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 TMEM253P0C7T8 217 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 ADH5P11766 374 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 GABRG2P18507 467 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 GPD1P21695 349 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 GRIA2P42262 883 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 SSR1P43307 286 aaKnown RBP11.8□□□□□ -0.52
TMEM116-218ENST00000552839 TNFRSF4P43489 277 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 NOP2P46087 812 aaKnown RBP11.8□□□□□ -0.52
TMEM116-218ENST00000552839 RPL34P49207 117 aaKnown RBP11.8□□□□□ -0.52
TMEM116-218ENST00000552839 GALCP54803 685 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 KDSRQ06136 332 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 ZNF33AQ06730 810 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 COL28A1Q2UY09 1125 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 DNAAF5Q86Y56 855 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 DEFB106AQ8N104 65 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 PHTF2Q8N3S3 785 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 KIAA1958Q8N8K9 716 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 ACRBPQ8NEB7 543 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 ZNF564Q8TBZ8 553 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-218ENST00000552839 DESI2Q9BSY9 194 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 NUP85Q9BW27 656 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 ISCUQ9H1K1 167 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 ARHGEF4Q9NR80 690 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 DNAAF2Q9NVR5 837 aaKnown RBP11.8□□□□□ -0.52
TMEM116-218ENST00000552839 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMEM116-218ENST00000552839 SMPD4Q9NXE4 827 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 IL37Q9NZH6 218 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 NUDT5Q9UKK9 219 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 PCDHA13Q9Y5I0 950 aa11.8□□□□□ -0.52
TMEM116-218ENST00000552839 TMEM110-MUSTN1A8MSY1 372 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 MDM4O15151 490 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 COCHO43405 550 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 SH3BP5O60239 455 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 GJB3O75712 270 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 OAS1P00973 400 aaKnown RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 PDGFRAP16234 1089 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 FECHP22830 423 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 PSMA2P25787 234 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 NOS2P35228 1153 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 MATKP42679 507 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 GSCP56915 257 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 KIF5AQ12840 1032 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 NME3Q13232 169 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 HNRNPDQ14103 355 aaKnown RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 TRIP6Q15654 476 aaKnown RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 IFI16Q16666 785 aaKnown RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 CDO1Q16878 200 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 ASTE1Q2TB18 679 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 LY6G5CQ5SRR4 150 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 RAD9BQ6WBX8 426 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 SLC36A4Q6YBV0 504 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 SCD5Q86SK9 330 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 SLC41A1Q8IVJ1 513 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 RHOT2Q8IXI1 618 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 EMC1Q8N766 993 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 PNPLA1Q8N8W4 532 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 DQX1Q8TE96 717 aaKnown RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 ADAMTS14Q8WXS8 1223 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 PIWIL1Q96J94 861 aaKnown RBP11.79□□□□□ -0.52
TMEM116-218ENST00000552839 PACSIN1Q9BY11 444 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 TSGA10Q9BZW7 698 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 DDIT4Q9NX09 232 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 CFAP97Q9P2B7 532 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 UVRAGQ9P2Y5 699 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 LCMT1Q9UIC8 334 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 ANAPC7Q9UJX3 599 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 INTUQ9ULD6 942 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 NAALADL1Q9UQQ1 740 aa11.79□□□□□ -0.52
TMEM116-218ENST00000552839 IGHV1OR15-9A0A0B4J2B8 117 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 TBC1D3BA6NDS4 549 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms