RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 RNASEH2AO75792 299 aaKnown RBP11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 GOT1P17174 413 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 ITGB6P18564 788 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 SLC8A1P32418 973 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 CD70P32970 193 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 ASPAP45381 313 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 AP3M2P53677 418 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 ADPRHP54922 357 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 ZNF445P59923 1031 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 STK38Q15208 465 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 ZNF574Q6ZN55 896 aaPredicted RBP11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 CCDC73Q6ZRK6 1079 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 PARP9Q8IXQ6 854 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 AADATQ8N5Z0 425 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 KDM1BQ8NB78 822 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 FAM131CQ96AQ9 280 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 DUSP16Q9BY84 665 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 STRIP2Q9ULQ0 834 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 HEMK1Q9Y5R4 338 aaPredicted RBP11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 CLIC4Q9Y696 253 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 U3KQA8 63 aa11.82□□□□□ -0.52
SUPT16H-202ENST00000552829 CREBBPQ92793 2442 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 UTP20O75691 2785 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 LRRIQ3A6PVS8 624 aaPredicted RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 RNASEH1O60930 286 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 SDC3O75056 442 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 LATS1O95835 1130 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 ASS1P00966 412 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 GP1BAP07359 652 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 GP1BBP13224 206 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 P4HA1P13674 534 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 POLR2EP19388 210 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 DGKAP23743 735 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 SGSHP51688 502 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 PPP2CBP62714 309 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 PPP2CAP67775 309 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 BIRC3Q13489 604 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 SGSM1Q2NKQ1 1148 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 RAB41Q5JT25 222 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 MPP7Q5T2T1 576 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 ADGRF1Q5T601 910 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 ATG14Q6ZNE5 492 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 BHLHA9Q7RTU4 235 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 MMAAQ8IVH4 418 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 TAF4BQ92750 862 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 OMDQ99983 421 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 UBXN6Q9BZV1 441 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 DACH1Q9UI36 760 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 INTS6Q9UL03 887 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 CFAP45Q9UL16 551 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
SUPT16H-202ENST00000552829 TARSL2A2RTX5 802 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CLEC18AA5D8T8 446 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 MAGEC1O60732 1142 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 AFPP02771 609 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 NUDT1P36639 197 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 DAB2P98082 770 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 NFKB2Q00653 900 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CLN3Q13286 438 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 ISXQ2M1V0 245 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 ZACNQ401N2 412 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 PIK3R6Q5UE93 754 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 PM20D1Q6GTS8 502 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CAVIN1Q6NZI2 390 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CNNM4Q6P4Q7 775 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CLEC18BQ6UXF7 455 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CCDC81Q6ZN84 652 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 SND1Q7KZF4 910 aaKnown RBP eCLIP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 ARHGAP18Q8N392 663 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CLEC18CQ8NCF0 446 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 OR14C36Q8NHC7 312 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 GRAMD1AQ96CP6 724 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CCDC97Q96F63 343 aaPredicted RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 SEMA3CQ99985 751 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 PANK2Q9BZ23 570 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 KBTBD4Q9NVX7 518 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 UCKL1Q9NWZ5 548 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CGNQ9P2M7 1197 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 CYTH4Q9UIA0 394 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 SATB2Q9UPW6 733 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 DMTF1Q9Y222 760 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 HBS1LQ9Y450 684 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 PCDHGA8Q9Y5G5 932 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 UBE4BO95155 1302 aa11.8□□□□□ -0.52
SUPT16H-202ENST00000552829 RELNP78509 3460 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 ICE1Q9Y2F5 2266 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 MBD3O95983 291 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 ASLP04424 464 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 SLFN14P0C7P3 912 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 C5AR1P21730 350 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 DRD3P35462 400 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 TXLNAP40222 546 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 CSKP41240 450 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms