RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 CD68P34810 354 aaPredicted RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 TUFMP49411 452 aaKnown RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 TUBP50607 506 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 CDK16Q00536 496 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 ZNF33AQ06730 810 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 ZBTB17Q13105 803 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 RASA2Q15283 850 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 PARP6Q2NL67 630 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 MS4A13Q5J8X5 152 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 TPGS2Q68CL5 300 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 KIAA1841Q6NSI8 718 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 RWDD4Q6NW29 188 aaKnown RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 DDX53Q86TM3 631 aaKnown RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 SUGP1Q8IWZ8 645 aaKnown RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 TMEM199Q8N511 208 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 TMEM169Q96HH4 297 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 CELF6Q96J87 481 aaKnown RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 TSGA13Q96PP4 275 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 CCDC77Q9BR77 488 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 DHRS4Q9BTZ2 278 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 HERC2P3Q9BVR0 1158 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 STMN4Q9H169 189 aaPredicted RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
PFDN5-216ENST00000552341 SEPT10Q9P0V9 454 aa11.14□□□□□ -0.63
PFDN5-216ENST00000552341 ALPK3Q96L96 1907 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 A6NNZ2 444 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 STK10O94804 968 aaKnown RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 LAG3P18627 525 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 PSMB4P28070 264 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 LSP1P33241 339 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 GNGT1P63211 74 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 RING1Q06587 406 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 TUBB8Q3ZCM7 444 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 SPOUT1Q5T280 376 aaKnown RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 LRRC31Q6UY01 552 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 ARHGAP36Q6ZRI8 547 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 OTOP2Q7RTS6 562 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 RIBC1Q8N443 379 aaPredicted RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 LZTR1Q8N653 840 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 PDCD7Q8N8D1 485 aaKnown RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 MDM1Q8TC05 714 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 FBF1Q8TES7 1133 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 ARHGEF2Q92974 986 aaKnown RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 LRRC39Q96DD0 335 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 ZNF419Q96HQ0 510 aaPredicted RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 MYRFLQ96LU7 910 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 PRMT1Q99873 361 aaKnown RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 FAM107BQ9H098 131 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 NOL6Q9H6R4 1146 aaKnown RBP11.13□□□□□ -0.63
PFDN5-216ENST00000552341 IL23AQ9NPF7 189 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 MPP6Q9NZW5 540 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 ZNF212Q9UDV6 495 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 TBK1Q9UHD2 729 aa11.13□□□□□ -0.63
PFDN5-216ENST00000552341 TCRBV9S1A1TA0A576 114 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 F5H423 210 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 TLR5O60602 858 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 MAFKO60675 156 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 LILRB3O75022 631 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 PIAS1O75925 651 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 MLNP12872 115 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 CCNCP24863 283 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 PHBP35232 272 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 PPARDQ03181 441 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 RAB33AQ14088 237 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.633e-12■■■■■ 83.7
PFDN5-216ENST00000552341 TEX44Q53QW1 395 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 KCTD11Q693B1 232 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 PID1Q7Z2X4 250 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 TADA2BQ86TJ2 420 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 PALM2Q8IXS6 379 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 MPP5Q8N3R9 675 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 CNTD1Q8N815 330 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 RTL3Q8N8U3 475 aaKnown RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 BTN2A3PQ96KV6 586 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 TEKT5Q96M29 485 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 XPO6Q96QU8 1125 aaKnown RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 FERMT1Q9BQL6 677 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 SLC39A8Q9C0K1 460 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 CATSPERBQ9H7T0 1116 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 CNOT10Q9H9A5 744 aaKnown RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 PPCSQ9HAB8 311 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 XAB2Q9HCS7 855 aaKnown RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 VANGL2Q9ULK5 521 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 MAGED2Q9UNF1 606 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 ANAPC1Q9H1A4 1944 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 SLC12A8A0AV02 714 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 POC1B-GALNT4F8VUJ3 575 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 ZBTB24O43167 697 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 MTSS1O43312 755 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 CACNG3O60359 315 aa11.12□□□□□ -0.63
PFDN5-216ENST00000552341 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 HTRA4P83105 476 aaPredicted RBP11.12□□□□□ -0.63
PFDN5-216ENST00000552341 MPP2Q14168 576 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms