RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 HMX2A2RU54 273 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 DNAJC8O75937 253 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 UBOX5O94941 541 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 SELPP16109 830 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CCR1P32246 355 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 HTR7P34969 479 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 COG7P83436 770 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 ZNF33AQ06730 810 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 NIPAL4Q0D2K0 466 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 BMPR2Q13873 1038 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CRYMQ14894 314 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 NFE2Q16621 373 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 TTC31Q49AM3 519 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 FAM133BQ5BKY9 247 aaKnown RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 KCTD11Q693B1 232 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 ITPRIPL1Q6GPH6 555 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 RWDD4Q6NW29 188 aaKnown RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 MARK2Q7KZI7 788 aaKnown RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 OTOAQ7RTW8 1153 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 UNC5BQ8IZJ1 945 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CNPY4Q8N129 248 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 GBP7Q8N8V2 638 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 OR52K1Q8NGK4 314 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 ZSCAN18Q8TBC5 510 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 DPF3Q92784 378 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CELF6Q96J87 481 aaKnown RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 C8orf48Q96LL4 319 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 MANSC1Q9H8J5 431 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 MKS1Q9NXB0 559 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 GGT7Q9UJ14 662 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 PHF24Q9UPV7 400 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 TTC3P53804 2025 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 ERI2A8K979 691 aaKnown RBP14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 ENPP3O14638 875 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 SYN3O14994 580 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 PAGE1O75459 146 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 CNTFP26441 200 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 HOXC13P31276 330 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 NAB1Q13506 487 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 PPP2R5DQ14738 602 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 VARS2Q5ST30 1063 aaKnown RBP14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 MANEALQ5VSG8 457 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 TIFABQ6ZNK6 161 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 PACS2Q86VP3 889 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 NUP93Q8N1F7 819 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 TEKT5Q96M29 485 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 AGAP3Q96P47 875 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 TSGA13Q96PP4 275 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 ELAC1Q9H777 363 aaKnown RBP14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 CASS4Q9NQ75 786 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 SCML2Q9UQR0 700 aa14.36□□□□□ -0.11
RAB3IP-216ENST00000552199 VWA8A3KMH1 1905 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 MSI1O43347 362 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 JCHAINP01591 159 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 NFKB1P19838 968 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 CDK7P50613 346 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 OLIG2Q13516 323 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 DDR2Q16832 855 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 ARTNQ5T4W7 220 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 MROH9Q5TGP6 573 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 CDHR3Q6ZTQ4 885 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 MON1AQ86VX9 555 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 CDKL2Q92772 493 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 TBC1D31Q96DN5 1066 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 FCRL2Q96LA5 508 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 MLPHQ9BV36 600 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 IQCGQ9H095 443 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 ALG13Q9NP73 1137 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 OSER1Q9NX31 292 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 PLLPQ9Y342 182 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 PCDHB5Q9Y5E4 795 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 USH1CQ9Y6N9 552 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 HTTP42858 3142 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 PLXNA3P51805 1871 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 KCNU1A8MYU2 1149 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 FGF10O15520 208 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 NBNO60934 754 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 POLBP06746 335 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 CCNCP24863 283 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 MAGEA11P43364 429 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 GPR15P49685 360 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 CCDC15Q0P6D6 951 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 MRPL58Q14197 206 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 GPNMBQ14956 572 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 CTXN3Q4LDR2 81 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 SDHAF4Q5VUM1 108 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 FBXW10Q5XX13 1052 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 ARHGAP12Q8IWW6 846 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 PTPRN2Q92932 1015 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 THOC1Q96FV9 657 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 CATSPERBQ9H7T0 1116 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms